Job Description A0JLX3 Confidence 97.50% Date Wed Jul 10 14:37:17 BST 2013 Rank 349 Aligned Residues 130 % Identity 13% Template c3f2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase alpha; PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3 Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		E	K	F	H	A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	.	.	.	.	.	.	.	R	L	T	G	T	H	V	A	V	K	V	I	V	K	R	E	C	W	F	N	P	V	M	S	E	A	E
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		R	G	L	R	E	D	E	F	H	I	S	V	I	R	G	G	L	S	N	M	L	F	Q	C	S	L	P	D	T	T	A	T	L	G	D	E	P	R	K	V	L	L	R	L	Y	G	.	.	.	.	.	.	.	A	M	V	L	E	S	V
Template Known Secondary structure		T	T			G	G	G									S	S	S										T	T				S	S	S			S									.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.
		55	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		L	L	M	M	T	.	D	H	P	N	I	I	S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E	A	C	P	L	F	K	Q	L	L	S
Query Conservation							.
Alig confidence							.															.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		M	F	A	I	L	A	E	R	S	L	G	P	K	L	Y	G	I	F	P	Q	.	.	.	.	G	R	L	E	Q	F	I	P	S	R	R	L	D	T	E	E	L	S	L	P	.	.	.	.	.	.	.	.	D	I	S	A	E	I	A	E
Template Known Secondary structure									T	T	S	S								T	T	.	.	.	.														G	G	G	G	G	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.									.	.	.	.	.	.	.	230
		114	.	.	.	.	.	120	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	N	Y	C	H	N	Q	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	A	T	F	H	G	M	K	M	P	F	N	K	E	P	K	W	L	F	G	T	M	E	K	Y	L	K	E	V	L	R	I	K	F	T	E	E	S	R	I	K	K	L	H	K	L	L	S	Y	N	L	P	L	E	L	E	N	L	R
Template Known Secondary structure								T				S	S			S																	T					S												T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
														124	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	H	R	D	L	T	P	D	N	I	M	V	.	.	.	.	.	.	E	K	D	G	K	V	K	I	I	D	F	G	L	G	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	L	E	S	T	P	S	P	V	V	F	C	H	N	D	C	Q	E	G	N	I	L	L	L	E	G	R	E	N	S	E	K	Q	K	L	M	L	I	D	F	E	Y	S	S
Template Known Secondary structure						T	S									S			S	G	G	G					T	T	G	G	G		S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D