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Job DescriptionA0JLX3
Confidence99.95%DateWed Jul 10 14:37:17 BST 2013
Rank320Aligned Residues193
% Identity23%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10 .........20.........30.........40.. .......50.
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Query Sequence  KFHAQYEM. . LETIGQGGCAQVKLAQHRLTGTHVAVKVIVKR. . . . . . . . . ECWFNPVMS
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Template Sequence  KIIPNYRTDMVEVNWIGAEADIKRDSYL. . DFDVIIKERVKKGYRDERLDENIRKSRTAR
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   309310.........320.........330...... ...340.........350.........360......
 
   52.......60.........70.........80.........90.........100.........110.
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Query Sequence  EAELLMMTDHPNIISLLQVIETKKKLYLIMELCEGKSLYQHIQNAGYLQEDEACPLFKQL
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Template Sequence  EARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . LDIAYKI
Template Known Secondary structure  GGGTT




TTTT


SGGGTTTT
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   384.....390.........400.........410.........420........ .430.....
 
   112.......120.........130.........140.........150.........160.........170.
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Query Sequence  LSAVNYCHNQGIVHRDLTPDNIMVEKDGKVKIIDFGLGTQEKPAQKLNLFCENYPFSTPE
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Template Sequence  GEIVGKLHKNDVIHNDLTTSNFIF. . DKDLYIIDFGLGKISNLDED. . . . KAVDLIVFKK
Template Known Secondary structure  TT
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   436...440.........450......... 460.........470......... 480.........
 
   172.......180.........190.........200.........210......
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Query Sequence  VLLSRPYDMRKIDVWGLGVVLYFMVTGKILFDAASIEKLRKQIVA
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Template Sequence  AVLSTHH. EKFDEIWERFLEGYKSVYDR. . . . WEIILELMKDVER
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   490...... ...500.........510...... ...520.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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