Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 151 Aligned Residues 226 % Identity 30% Template c2z7qA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of the n-terminal kinase domain of human rsk-1 bound2 to amp-pcp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	R	.	.	.	L	T	G	T	H	V	A	V	K	V	I	V	K	R	E	C	W	F	N	P	V	M	S	E	A	E	L	L	M	M	T	D	H	P
Query Conservation																									.	.	.
Alig confidence																									.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	H	F	E	L	L	K	V	L	G	Q	G	S	F	G	K	V	F	L	V	R	K	V	T	R	P	D	S	G	H	L	Y	A	M	K	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	A	D	V	N	H	P
Template Known Secondary structure		G	G											T	T										S	S	S	S	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																.	.	.	100	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	I	S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E	A	C	P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	V	K	L	H	Y	A	F	Q	T	E	G	K	L	Y	L	I	L	D	F	L	R	G	G	D	L	F	T	R	L	S	K	E	V	M	F	T	E	E	D	V	K	F	Y	L	A	E	L	A	L	G	L	D	H	L	H	S	L	G
Template Known Secondary structure		T	B										T	T										T	T		B									S	S																							T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	D	M	R	K
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	Y	R	D	L	K	P	E	N	I	L	L	D	E	E	G	H	I	K	L	T	D	F	G	L	S	K	.	.	.	.	.	.	.	.	.	.	.	.	E	G	T	V	E	Y	M	A	P	E	V	V	N	R	Q	G	H	S	H	S
Template Known Secondary structure					T	T		S	G	G	G					S	S	S						S				S		.	.	.	.	.	.	.	.	.	.	.	.				G	G	G							T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210													.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q	I	V	A	G	K	C	S	V	P	C	R	L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	W	W	S	Y	G	V	L	M	F	E	M	L	T	G	S	L	P	F	Q	G	K	D	R	K	E	T	M	T	L	I	L	K	A	K	L	G	M	P	Q	F	L	S	T	E	A	Q	S	L	L	R	A	L	F	K	R	N	P	A
Template Known Secondary structure																	S	S		S	S			S	S											T						T	T	S														S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		243	.						.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		L	R	.	.	.	.	.	P	T	V	A	E	V	M	V	H	P	W	V	T	E
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		N	R	L	G	S	G	P	D	G	A	E	E	I	K	R	H	V	F	Y	S	T
Template Known Secondary structure		T	S	T	T	S	S	S	S	T						T	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D