Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 51 Aligned Residues 260 % Identity 33% Template c2y94A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5'-amp-activated protein kinase catalytic subunit alpha-1; PDBTitle: structure of an active form of mammalian ampk Resolution 3.24 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	K	R	E	C	W	F	.	.	.	.	N	P	V	M	S	E	A	E	L	L	M	M	T	D	H
Query Conservation																																											.	.	.	.
Alig confidence																																											.	.	.	.
Template Conservation
Template Sequence		G	H	Y	I	L	G	D	T	L	G	V	G	T	F	G	K	V	K	V	G	K	H	E	L	T	G	H	K	V	A	V	K	I	L	N	R	Q	K	I	R	S	L	D	V	V	G	K	I	R	R	E	I	Q	N	L	K	L	F	R	H
Template Known Secondary structure		T	T											S	S	S								T	T	T																	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	I	I	S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E	A	C	P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	H	I	I	K	L	Y	Q	V	I	S	T	P	S	D	I	F	M	V	M	E	Y	V	S	G	G	E	L	F	D	Y	I	C	K	N	G	R	L	D	E	K	E	S	R	R	L	F	Q	Q	I	L	S	G	V	D	Y	C	H	R	H
Template Known Secondary structure		T	T	B										S	S										S	S							T	T	S	S	S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	D	M	R
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		M	V	V	H	R	D	L	K	P	E	N	V	L	L	D	A	H	M	N	A	K	I	A	D	F	G	L	S	N	M	M	S	D	G	E	F	L	R	S	C	.	G	S	P	N	Y	A	A	P	E	V	I	S	G	R	L	Y	A	G	P
Template Known Secondary structure		T				S			S	G	G	G					T	T									S	S						T	T			B				.	S		S	T	T							T	T			B		S
Template Predicted Secondary structure																																										.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q	I	V	A	G	K	C	S	V	P	C	R	L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	D	I	W	S	S	G	V	I	L	Y	A	L	L	C	G	T	L	P	F	D	D	D	H	V	P	T	L	F	K	K	I	C	D	G	I	F	Y	T	P	Q	Y	L	N	P	S	V	I	S	L	L	K	H	M	L	Q	V	D	P
Template Known Secondary structure																		S	S		S	S			S	S	S									T	T						T	T													T		S	S	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	R	P	T	V	A	E	V	M	V	H	P	W	V	T	E	G	S	G	V	F	P	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	R	A	T	I	K	D	I	R	E	H	E	W	F	K	Q	D	L	P	K	Y	L	F	P
Template Known Secondary structure		T	T	S								T						T	T			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D