Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 251 Aligned Residues 241 % Identity 17% Template c2v62A_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2 Resolution 1.7 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	F	H	A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	C	W	F	N
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		D	M	E	G	N	Q	W	V	L	.	.	.	.	.	.	G	K	K	I	L	I	Y	L	A	F	P	T	N	K	P	E	K	D	A	R	H	V	V	K	V	E	Y	Q	E	G	P	L	F	S	E	L	K	F	Y	Q	R	V	A	K	K
Template Known Secondary structure			T	T	S						.	.	.	.	.	.												S	S	S		G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		P	V	M	S	E	A	E	L	L	M	M	T	D	H	P	N	I	I	S	L	L	Q	V	I	E	T	.	.	.	.	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.												.
Template Conservation																																											.
Template Sequence		D	C	I	K	K	W	I	E	R	K	Q	L	D	Y	L	G	I	P	L	F	Y	G	S	G	L	T	E	F	K	G	R	S	Y	R	F	M	V	M	E	R	L	.	G	I	D	L	Q	K	I	S	G	Q	N	G	T	F	K	K	S	T
Template Known Secondary structure												T		S															S	S	S												.									B	G	G	G	B
Template Predicted Secondary structure																																											.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.																						.	.	.
Query SS confidence																																				.	.																						.	.	.
Query Sequence		A	C	P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q	G	I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	.	.	D	G	K	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	.	.	.
Query Conservation																																				.	.																						.	.	.
Alig confidence																																				.	.																						.	.	.
Template Conservation
Template Sequence		V	L	Q	L	G	I	R	M	L	D	V	L	E	Y	I	H	E	N	E	Y	V	H	G	D	I	K	A	A	N	L	L	L	G	Y	K	N	P	D	Q	V	Y	L	A	D	Y	G	L	S	Y	R	Y	C	P	N	G	N	H	K	Q	Y
Template Known Secondary structure																			T	T				S			S	G	G	G					S	S	S	T	T	S							T	T				S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
							159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	L	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	D	M	R	K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																					.
Template Conservation																											.
Template Sequence		Q	E	N	P	R	K	G	H	N	G	T	I	E	F	T	S	L	D	A	H	K	G	V	A	L	.	S	R	R	S	D	V	E	I	L	G	Y	C	M	L	R	W	L	C	G	K	L	P	W	E	Q	N	L	K	D	P	V	A	V	Q
Template Known Secondary structure					G	G	G		S		S		T	T	T								T				.																			S	S		T	T	G	G	G	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		214	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	A	G	.	.	.	.	.	.	.	.	.	.	.	K	C	S	V	P	C	R	L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P	E	L	R	P	T	V	A	E	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	K	T	N	L	L	D	E	L	P	Q	S	V	L	K	W	A	P	S	G	S	S	C	C	E	I	A	Q	F	L	V	C	A	H	S	L	A	Y	D	E	K	P	N	Y	Q	A	L
Template Known Secondary structure										T	T	T							S		T	T	S														T			T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D