Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 255 Aligned Residues 244 % Identity 19% Template c2jiiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3 Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	F	H	A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	K	R	.	.	.	.	.	.	.	.	.	.	.	E	C	W	F	N	P	V	M
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		D	K	S	G	R	Q	W	K	L	K	S	F	Q	T	R	D	N	Q	G	I	L	Y	E	A	A	P	.	.	.	T	S	K	F	S	L	K	L	D	A	K	D	G	R	L	F	N	E	Q	N	F	F	Q	R	A	A	K	P	L	Q	V
Template Known Secondary structure			T	T	S													T	T									.	.	.											T	T	S	T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.
Predicted Secondary structure																						.																													.	.
Query SS confidence																						.																													.	.
Query Sequence		S	E	A	E	L	L	M	M	T	D	H	P	N	I	I	S	L	L	Q	V	.	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	.	.	L	Q	E	D	E	A	C	P	L
Query Conservation																						.																													.	.
Alig confidence																						.															.														.	.
Template Conservation																																					.
Template Sequence		N	K	W	K	K	L	Y	S	T	P	L	L	A	I	P	T	C	M	G	F	G	V	H	Q	D	K	Y	R	F	L	V	L	P	S	L	.	G	R	S	L	Q	S	A	L	D	V	S	P	K	H	V	L	S	E	R	S	V	L	Q	V
Template Known Secondary structure								T	T		T	T		S											T	T	T										.											S	G	G	G
Template Predicted Secondary structure																																					.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																					.	.																				.	.	.	.
Query SS confidence																																					.	.																				.	.	.	.
Query Sequence		F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q	G	I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	V	K	.	.	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	F	.	.	.	.
Query Conservation																																					.	.																				.	.	.	.
Alig confidence																																					.	.																				.	.	.	.
Template Conservation
Template Sequence		A	C	R	L	L	D	A	L	E	F	L	H	E	N	E	Y	V	H	G	N	V	T	A	E	N	I	F	V	D	P	E	D	Q	S	Q	V	T	L	A	G	Y	G	F	A	F	R	Y	C	P	S	G	K	H	V	A	Y	V	E	G	S
Template Known Secondary structure															T	T		B		S				G	G	G					T	T										G	G	G		B		S	S	G	G	G							T	T	S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
						162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.																																														.	.	.	.	.
Query SS confidence		.	.	.	.																																														.	.	.	.	.
Query Sequence		.	.	.	.	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	D	M	R	K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	A	S	.	.	.	.	.	I	E	K	L	R	K
Query Conservation		.	.	.	.																																														.	.	.	.	.
Alig confidence		.	.	.	.																		.																												.	.	.	.	.
Template Conservation																							.
Template Sequence		R	S	P	H	E	G	D	L	E	F	I	S	M	D	L	H	K	G	C	G	P	.	S	R	R	S	D	L	Q	S	L	G	Y	C	M	L	K	W	L	Y	G	F	L	P	W	T	N	C	L	P	N	T	E	D	I	M	K	Q	K	Q
Template Known Secondary structure		S		T	T		S		T	T	T							T	T				.																			S			T	T	G	G	G	T	T
Template Predicted Secondary structure																							.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.							.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		Q	I	V	A	G	K	C	S	V	P	C	R	.	.	.	.	.	.	L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P	E	L	R	P	T	V	A	E	V
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	V	D	K	P	G	P	F	V	G	P	C	G	H	W	I	R	P	S	E	T	L	Q	K	Y	L	K	V	V	M	A	L	T	Y	E	E	K	P	P	Y	A	M	L
Template Known Secondary structure						S							T	T	S																		T			T	T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D