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Job DescriptionA0JLX3
Confidence100.00%DateWed Jul 10 14:37:17 BST 2013
Rank80Aligned Residues252
% Identity27%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40. ........50......... 60
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Query Sequence  AQYEMLETIGQGGCAQVKLAQHRLTGTHVAVKVIVK. . . . RECWFNPVMSEAELLMMT. D
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK
Template Known Secondary structure  TTTTTTSS
T
T
TT
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   340.........350.........360.........370.........380.........390.........
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  HPNIISLLQVIETKKKLYLIMELCEGKSLYQHIQNAGYLQEDEACPLFKQLLSAVNYCHN
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Template Sequence  PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS
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TTB

TT


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BTTSS

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   400.........410.........420.........430.........440.........450.........
 
   121........130.........140.........150.........160.........170.........180
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Query Sequence  QGIVHRDLTPDNIMVEKDGKVKIIDFGLGTQEKPAQKLNLFCENYPFSTPEVLLSRPYDM
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Template Sequence  KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKFCGTPDYIAPEIIAYQPY. G
Template Known Secondary structure  TT
B



SGGG
TTS



TT
B
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TT

B


S
TTT

TT

B.
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   460.........470.........480.........490.........500.........510....... .
 
   181........190.........200.........210.........220.........230.........240
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Query Sequence  RKIDVWGLGVVLYFMVTGKILFDAASIEKLRKQIVAGKCSVPCRLSVELQDLIRLLMTDN
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Template Sequence  KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKH
Template Known Secondary structure  TSS
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TTS
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   520.........530.........540.........550.........560.........570.........
 
   241..... ...250........
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Query Sequence  PELRPT. . . . . VAEVMVHPWVTE
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Template Sequence  PGKRLGCGPEGERDIKEHAFFRY
Template Known Secondary structure  GGGSTT
STTTSGGGTT
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   580.........590.........600..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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