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Job DescriptionA0JLX3
Confidence100.00%DateWed Jul 10 14:37:17 BST 2013
Rank55Aligned Residues257
% Identity23%Templatec2h8hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase src; PDBTitle: src kinase in complex with a quinazoline inhibitor
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60....
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Query Sequence  HAQYEMLETIGQGGCAQVKLAQHRLTGTHVAVKVIVKRECWFNPVMSEAELLMMTDHPNI
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Template Sequence  RESLRLEVKLGQGCFGEVWMGTW. NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL
Template Known Secondary structure  GGG
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   264.....270.........280...... ...290.........300.........310.........320..
 
   65....70.........80.........90.. .......100.........110.........120..
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Query Sequence  ISLLQVIETKKKLYLIMELCEGKSLYQH. . IQNAGYLQEDEACPLFKQLLSAVNYCHNQG
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Template Sequence  VQLYAVVS. EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN
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   323......330 .........340.........350.........360.........370.........380.
 
   123......130.........140.........150.........160... ......170.........180
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Query Sequence  IVHRDLTPDNIMVEKDGKVKIIDFGLGTQEKPAQKLNLFCE. . NYPFSTPEVLLSRPYDM
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Template Sequence  YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF. T
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SGGG
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   382.......390.........400.........410.........420.........430......... 440
 
   181........190....... ..200.........210....... ..220.........230........
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Query Sequence  RKIDVWGLGVVLYFMVT. GKILFDAASIEKLRKQIVAG. KCSVPCRLSVELQDLIRLLMT
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Template Sequence  IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWR
Template Known Secondary structure  TTTT

SSTT

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   441........450.........460.........470.........480.........490.........500
 
   239240.........250.. .......260....
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Query Sequence  DNPELRPTVAEVMV. . HPWVTEGSGVFP
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Template Sequence  KEPEERPTFEYLQAFLEDYFTSTEPQQP
Template Known Secondary structure  SSGGGS

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   501........510.........520........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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