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Job DescriptionA0JLX3
Confidence100.00%DateWed Jul 10 14:37:17 BST 2013
Rank43Aligned Residues255
% Identity27%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  AQYEMLETIGQGGCAQVKLAQHRLTGTHVAVKVIVKRECWFNPVMSEAELLMMTDHPNII
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVV
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TTB
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   7..10.........20.........30.........40...... ...50.........60.....
 
   66...70.........80.........90.........100.........110.........120.....
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Query Sequence  SLLQVIETKKKLYLIMELCEGKSLYQHIQNAGYLQEDEACPLFKQLLSAVNYCHNQGIVH
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Template Sequence  KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH
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STT


TTGGGGSBTTTB

TT
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   6970.........80.........90.........100.........110.........120........
 
   126...130.........140......... 150.........160.........170.........180..
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Query Sequence  RDLTPDNIMVEKDGKVKIIDFGLG. . . TQEKPAQKLNLFCENYPFSTPEVLLSRPYDMRK
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Template Sequence  RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP
Template Known Secondary structure  S

SGGG
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TT

TT

B
S

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GGGS

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   129130.........140.........150.........160.........170.........180........
 
   183......190.........200.........210.........220... ......230.........
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Query Sequence  IDVWGLGVVLYFMVTGKILFDAASIEKLRKQIVAGKCSVPC. . . RLSVELQDLIRLLMTD
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Template Sequence  VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVE
Template Known Secondary structure  SS
S
SS

TT
TT
TTSTTGGGT
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S
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   189190.........200.........210.........220.........230.........240........
 
   240.........250.........260.
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Query Sequence  NPELRPTVAEVMVHPWVTEGSG
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Template Sequence  NPSARITIPDIKKDRWYNKPLK
Template Known Secondary structure  STTTS

TT
TTTT



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   249250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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