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Job DescriptionA0JLX3
Confidence100.00%DateWed Jul 10 14:37:17 BST 2013
Rank38Aligned Residues252
% Identity30%Templatec1xjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, theta type; PDBTitle: crystal structure of pkc-theta complexed with staurosporine2 at 2a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40..... ....50........ .60
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Query Sequence  AQYEMLETIGQGGCAQVKLAQHRLTGTHVAVKVIVKRECW. . . . FNPVMSEAELLMM. TD
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Template Sequence  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE
Template Known Secondary structure  TT
SSSTTTTTT
TT
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   378.380.........390.........400.........410.........420.........430.......
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  HPNIISLLQVIETKKKLYLIMELCEGKSLYQHIQNAGYLQEDEACPLFKQLLSAVNYCHN
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Template Sequence  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS
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TTB


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TT
BSS

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   438.440.........450.........460.........470.........480.........490.......
 
   121........130.........140.........150.........160.........170.........180
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Query Sequence  QGIVHRDLTPDNIMVEKDGKVKIIDFGLGTQEKPAQKLNLFCENYPFSTPEVLLSRPYDM
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Template Sequence  KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNFCGTPDYIAPEILLGQKY. N
Template Known Secondary structure  TT
B




GGG
TTS



TT
B



TT

B


S
GGG

TT

B.
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   498.500.........510.........520.........530.........540.........550..... .
 
   181........190.........200.........210.........220.........230.........240
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Query Sequence  RKIDVWGLGVVLYFMVTGKILFDAASIEKLRKQIVAGKCSVPCRLSVELQDLIRLLMTDN
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Template Sequence  HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVRE
Template Known Secondary structure  TSS
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TTS
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   558.560.........570.........580.........590.........600.........610.......
 
   241...... ..250........
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Query Sequence  PELRPTV. AEVMVHPWVTE
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Template Sequence  PEKRLGVRGDIRQHPLFRE
Template Known Secondary structure  GGGSBTTBS
GGGSGGGTT
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   618.620.........630......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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