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Job DescriptionA1L3T7
Confidence96.82%DateTue Jul 30 12:55:19 BST 2013
Rank51Aligned Residues216
% Identity16%Templatec4hxtA_
PDB info PDB header:de novo proteinChain: A: PDB Molecule:de novo protein or329; PDBTitle: crystal structure of engineered protein. northeast structural genomics2 consortium target or329
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   682.......690.........700.........710.........720.........730.........740.
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Query Sequence  GGLALWQGCTQPGGVLACPASTLLSQLKKTFLHRVRGKYPGQLEIVCRRLLEQVVGCGGL
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Template Sequence  DVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEV. .
Template Known Secondary structure  TT
S
TS
TTTT
S
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   3......10.........20.........30.........40.........50.........60
 
   742.......750.........760.........770.........780.........790.........800.
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Query Sequence  LVPAGLQEEQVVTWFQFHSYLQRQSISDLEKHLAQLTKEVTLIEELSCAGPAKALRKLHG
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Template Sequence  . . . . . . . . . . QKEAARALANIASGPDEAIKAIVDAGGVEV. LVKLLTSTDSEVQKEAARA
Template Known Secondary structure  ..........TTS
TT.TT
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   61........70.........80.........90 .........100.........
 
   802.......810 .........820.........830.........840.........850
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Query Sequence  KCLSQLQPL. . . . . . . . PQTLQAWALLQLDGPPRLCRAARTRLASAARNKRFREKAL. . .
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Template Conservation                                                              
Template Sequence  LANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA
Template Known Secondary structure  TTS
TTTT
S
TTS
T
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   110.........120.........130.........140.........150.........160.........
 
   851........860.........870....... ..880.........890......
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Query Sequence  . . . LYYTNALNDSDAKVQQAACVALQQLGG. . . . . . . . . . . IESCEQIVSLCQSDLEAVR
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Template Sequence  GGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQ
Template Known Secondary structure  TTT
S
TTSBTTGGG
S
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   170.........180.........190.........200.........210.........220.........
 
   897..900.........910
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Query Sequence  VAAREATLSFGEKG
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Template Sequence  KEAQRALENIKSGG
Template Known Secondary structure  T
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   230.........240...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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