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Job DescriptionA1L3T7
Confidence20.95%DateTue Jul 30 12:55:19 BST 2013
Rank191Aligned Residues110
% Identity18%Templatec2hq6A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:serologically defined colon cancer antigen 10; PDBTitle: structure of the cyclophilin_cecyp16-like domain of the serologically2 defined colon cancer antigen 10 from homo sapiens
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201....... .210.........220......... 230.....
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Query Sequence  LGEFQVKM. . . . . . KGLVGYARLCPGDQYEVLMRL. . . . . . . . . . . . . . . . . . . GRQRWR
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Template Sequence  AGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYG
Template Known Secondary structure  TBTTT
TTTTTT

TTT

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TTS
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   21........30.........40.........50.........60.........70.........80
 
   236...240.........250.........260. ........270..... ....280........
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Query Sequence  LKGRIEPDDSQTWDEEERVFVPTVHE. . . . . NLEIKVTELRGLSS. . MVVGAVTCDVADF
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Template Sequence  APFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYN
Template Known Secondary structure  S
B



BTTB
S
SSS

SSTT
B
S
SS

GGGTTTS

GGG
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   81........90.........100.........110.........120.........130.........140
 
   289290.........300..... ....310........
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Query Sequence  FMARPQLVVVDITELGT. . . . . . . . . . IKLQLELLWNPLD
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Template Sequence  MLR. . . . . . . . LSEVDIDDDERPHNPHKIKSCEVLFNPFD
Template Known Secondary structure  ........TT
S
B
TTS
BSS


TT
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   141.. ......150.........160.........170..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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