Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence97.40%DateTue Jul 30 12:55:19 BST 2013
Rank28Aligned Residues131
% Identity16%Templatec3gq2B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:general vesicular transport factor p115; PDBTitle: crystal structure of the dimer of the p115 tether globular head domain
Resolution2.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   776...780. ........ 790.........800... ......810.........820... ...
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Query Sequence  QLTKEV. . TLIEELSC. . . . AGPAKALRKLHGKC. LSQLQPLPQTLQAWALLQLD. . GPP
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Template Sequence  HTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQAMEHLIHVLQTDRSDS
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   17..20.........30.........40.........50.........60.........70......
 
   827..830.........840....... ..850.........860.........870....
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Query Sequence  RLCRAARTRLASAARNKRFRE. . . . . . . . . . . . KALLYYTNALNDSDAKVQQAACVALQQ
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Template Sequence  EIIGYALDTLYNIISNDEEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTS
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   77..80.........90.........100.........110.........120.........130......
 
   875. ...880.........890.........900......
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Query Sequence  LG. . . . . . . . . . . . . GIESCEQIVSLCQSDLEAVRVAAREATLSF
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Template Sequence  LLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQAL
Template Known Secondary structure  SSTTGGGT
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   149150.........160.........170.........180.........190...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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