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Job DescriptionA1L3T7
Confidence93.66%DateTue Jul 30 12:55:19 BST 2013
Rank74Aligned Residues159
% Identity11%Templatec1lshA_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:lipovitellin (lv-1n, lv-1c); PDBTitle: lipid-protein interactions in lipovitellin
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   761........770....... ..780.........790.........800.......
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Query Sequence  YLQRQSISDLEKHLAQL. . . . . . . . . . . . . TKEVTLIEELSCAGPAKALRKLHGKCLSQL
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Template Sequence  ILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQ
Template Known Secondary structure  TT
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GGGTTT
T
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   426...430.........440.........450.........460.........470.........480.....
 
   808.810.........820.... .....830.........840.........850.........860
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Query Sequence  QPLPQTLQAWALLQLDG. . . . . . . PPRLCRAARTRLASAARNKRFREKALLYYTNALNDS
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Template Sequence  P. . . NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAI
Template Known Secondary structure  G...GGTTSTTSSS



S
TTTTGGGT

TTS
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   486 ...490.........500.........510.........520.........530.........540..
 
   861........870..... ....880.........890. ........900.........910........
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Query Sequence  DAKVQQAACVALQQL. GGIESCEQIVSLCQSD. LEAVRVAAREATLSFGEKGRLAFEKMD
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Template Sequence  KSELRIRSCIVFFESKPSVALVSMVAVRLRREPNLQVASFVYSQMRSLSRSSNPEFRDVA
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TT
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   543......550.........560.........570.........580.........590.........600..
 
   919920..
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Query Sequence  KLHS
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Template Sequence  AACS
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   603...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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