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Job DescriptionA1L3T7
Confidence96.67%DateTue Jul 30 12:55:19 BST 2013
Rank53Aligned Residues97
% Identity18%Templatec2w3cA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   810.........820.... .....830.........840...... ...850.........860.
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Query Sequence  LPQTLQAWALLQLDG. . PPRLCRAARTRLASAARNKRFR. . . . . . EKALLYYTNALNDSD
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Template Sequence  GIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNSQFTEIFIKQQENVTLLLSLLEEFD
Template Known Secondary structure  TTTTT
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   58.60.........70.........80.........90.........100.........110.......
 
   862.......870.... .....880.........890.........900......
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Query Sequence  AKVQQAACVALQQ. . . . . . . . . . . . . LGGIESCEQIVSLCQSDLEAVRVAAREATLSF
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Template Sequence  FHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQAL
Template Known Secondary structure  SSTTGGGG
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   136...140.........150.........160.........170.........180.........190...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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