|   |
776 | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | |
|
. | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | T | K | E | V | T | L | I | E | E | L | S | C | A | G | . |
. |
P | A | K | A | L | R | K | L | H | G | K | C | L | S | Q | L | . |
. |
. |
. |
. |
. |
. |
. |
Q | P | L | P | Q | T | L | Q | A | W | A | L | L | Q | L | D | G | P |
Query Conservation |   |
|
|
|   |
|   |   |
|
|   |   |
|   |
|   |   | . | . |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |
|
|   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   | . |   |   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |
Template Sequence |   |
E | M | T | L | E | . |
R | A | V | S | M | L | E | A | D | H | M | L | P | S | R | I | S | A | A | A | T | F | I | Q | H | E | C | F | Q | K | S | E | A | R | K | R | V | N | Q | L | R | G | I | L | K | L | L | Q | L | L | K | V | Q | N |
Template Known Secondary structure |   |
|
|
|  |  | . |  |  |  |  | T |
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | G | G | G |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
350 | . | . | . | . | |
. | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . |
  |
  |   |
826 | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 850 | . | . | . | . | . | . | . | . | . | |
860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | L | C | R | A | A | R | T | R | L | A | S | A | A | R | N | K | R | F | . |
. |
. |
. |
. |
. |
R | E | K | A | L | L | Y | Y | T | N | A | L | N | D | . |
S | D | A | K | V | Q | Q | A | A | C | V | A | L | Q | Q | L | G | G | I |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
|
|
|
|
|   |   |   |   |   |   |
|
|
| . |   |
|   |   |   |
|   |
|
|
|   |
|
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |
Template Sequence |   |
E | D | V | Q | R | A | V | C | G | A | L | R | N | L | V | F | E | D | N | D | N | K | L | E | V | A | E | L | N | G | V | P | R | L | L | Q | V | L | K | Q | T | R | D | L | E | T | K | K | Q | I | T | G | L | L | W | N | L | S | S | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
409 | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . |
  |
  |   |
879 | 880 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | |
|
|
. | . | . | 910 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
Query Sequence |   |
E | S | C | E | Q | I | V | S | L | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | S | D | L | E | A | V | R | V | A | A | R | E | A | T | L | S | F | . |
. |
. |
G | E | K | G |
Query Conservation |   |
|
|
|   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|   |
|
|   |
|
|   |
|
|
|
|   |   | . | . | . |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
D | K | L | K | N | L | M | I | T | E | A | L | L | T | L | T | E | N | I | I | I | P | F | S | G | W | P | E | G | D | Y | P | K | A | N | G | L | L | D | F | D | I | F | Y | N | V | T | G | C | L | R | N | M | S | S | A | G | A | D | G |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |
|
|
| G | G | G |
|
|
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
469 | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . |
  |
  |   |
911 | . | . | . | . | . | |
|
|
|
. | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | A | F | E | K | . |
. |
. |
. |
M | D | K | L | H | S | E | Q | E | A | F | C | Q | E | A | D | V | E |
Query Conservation |   |
|   |
|   |   |   | . | . | . | . |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | K | A | M | R | R | C | D | G | L | I | D | S | L | V | H | Y | V | R | G | T | I | A | D | Y | Q | P | D |
Template Known Secondary structure |   |
 |  |  |  |  | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
529 | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . |
  |