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Job DescriptionA1L3T7
Confidence96.91%DateTue Jul 30 12:55:19 BST 2013
Rank48Aligned Residues212
% Identity15%Templatec4db8B_
PDB info PDB header:de novo proteinChain: B: PDB Molecule:armadillo-repeat protein; PDBTitle: designed armadillo-repeat protein
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   682.......690.........700.........710.........720.........730.........740.
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Query Sequence  GGLALWQGCTQPGGVLACPASTLLSQLKKTFLHRVRGKYPGQLEIVCRRLLEQVVGCGGL
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Template Sequence  ELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQI. .
Template Known Secondary structure 
TSS
TTGGG
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   12.......20.........30.........40.........50.........60.........
 
   742.......750.........760.........770.........780.........790.........800.
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Query Sequence  LVPAGLQEEQVVTWFQFHSYLQRQSISDLEKHLAQLTKEVTLIEELSCAGPAKALRKLHG
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Template Sequence  . . . . . . . . . . LQEALWALSNIASGGNEQIQAVIDAGALPA. LVQLLSSPNEQILQEALWA
Template Known Secondary structure  ..........TS
TT
.TTS
S
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   70.........80.........90......... 100.........110........
 
   802..... ..810.........820.........830.........840.........850..
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Query Sequence  KCLSQL. . . . . . . . QPLPQTLQAWALLQLDGPPRLCRAARTRLASAARNKRFREKALLY.
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Template Sequence  LSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA
Template Known Secondary structure  TTS
TTGGG
S
TTS
T
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   119120.........130.........140.........150.........160.........170........
 
   853......860.........870...... ...880.........890......
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Query Sequence  . . . . . YTNALNDSDAKVQQAACVALQQLG. . . . . . . . . . . GIESCEQIVSLCQSDLEAVR
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Template Sequence  GALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQ
Template Known Secondary structure  T
GGG
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   179180.........190.........200.........210.........220.........230........
 
   897..900......
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Query Sequence  VAAREATLSF
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Template Sequence  KEAQEALEKL
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   239240........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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