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Job Description | A1L3T7 | Confidence | 27.05% | Date | Tue Jul 30 12:55:19 BST 2013 |
Rank | 159 | Aligned Residues | 101 |
% Identity | 12% | Template | c3gs3A_ |
PDB info |
PDB header:transcription, protein binding | Chain: A: PDB Molecule:symplekin; |
PDBTitle: structure of the n-terminal heat domain of symplekin from d.2 melanogaster
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Resolution | 2.40 Å |
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774 | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | A | Q | L | T | K | E | V | T | L | I | E | E | L | S | C | A | G | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | T | A | T | A | R | A | . |
K | V | V | D | W | C | N | E | L | V | I | A | S | P | S | T | K | C | E | L | L | A | K | V | Q | E | T | V | L | G | S | C | A | E | L | A | E | E | F | L | E | S | V | L | S | L | A | H | D | S | N | M |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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22 | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
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827 | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | |
. | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | L | C | R | A | A | R | T | R | L | A | S | A | A | R | . |
N | K | R | F | R | E | K | A | L | L | Y | Y | T | N | A | L | N | D | S | D | A | K | V | Q | Q | A | A | C | V | A | L | Q | Q | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | V | R | K | Q | V | V | A | F | V | E | Q | V | C | K | V | K | V | E | L | L | P | H | V | I | N | V | V | S | M | L | L | R | D | N | S | A | Q | V | I | K | R | V | I | Q | A | C | G | S | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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