Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence91.42%DateTue Jul 30 12:55:19 BST 2013
Rank77Aligned Residues298
% Identity11%Templated1lsha1
SCOP infoalpha-alpha superhelix Lipovitellin-phosvitin complex, superhelical domain Lipovitellin-phosvitin complex, superhelical domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   606...610.........620.........630.........640.........650.. .......660...
Predicted Secondary structure 









..


Query SS confidence 














































. .










Query Sequence  AGAPELDTLLTVHLQVCKALLQKLASPNLSRMVEDCLLEEAVQQRQV. . LEVLSDLDLEQ
Query Conservation 

 



 


 

  
  

  
 
 
  
     

  
  

 
..

 
  
    
Alig confidence 



















..
























..










Template Conservation   
 
    

   
  
   ..            
  

  

      
  
       
Template Sequence  TKGKNLESEIHTVLKHLVEN. . NQLSVHEDAPAKFLRLTAFLRNVDAGVLQSIWHKLHQQ
Template Known Secondary structure 
TTS
..
SSS

TTTTS
TTS
Template Predicted Secondary structure 




..











Template SS confidence 



























































   297..300.........310...... ...320.........330.........340.........350....
 
   664.....670.........680.........690.........700.........710.........720...
Predicted Secondary structure 
















Query SS confidence 



























































Query Sequence  VSKARSVEEIIPQASHRKGGLALWQGCTQPGGVLACPASTLLSQLKKTFLHRVRGKYPGQ
Query Conservation        
  

           

  
              
  
    
  
       
Alig confidence 








































........









.
Template Conservation     
   



   

  
   
   
    
   

   
........  
     

.
Template Sequence  KDYRRWILDAVPAMATSEALLFLKRTLASEQLTSAEATQIV. . . . . . . . ASTLSNQQAT.
Template Known Secondary structure 
STT
S
........T



.
Template Predicted Secondary structure 







........




.
Template SS confidence 



























































   355....360.........370.........380.........390..... ....400.....
 
   724.....730.........740.........750.........760.........770.........780. .
Predicted Secondary structure 
















.
Query SS confidence 

























































.
Query Sequence  LEIVCRRLLEQVVGCGGLLVPAGLQEEQVVTWFQFHSYLQRQSISDLEKHLAQLTKEV. T
Query Conservation     
   

                     
 

  

     
  
     


 
 . 
Alig confidence  .....




















































.
Template Conservation  .....   
  
  
           
  

 

 
 

   
          
  
   
Template Sequence  . . . . . RESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDL
Template Known Secondary structure  .....T
T
TT
SS

GGGT
Template Predicted Secondary structure  .....













Template SS confidence 



























































   406...410.........420.........430.........440.........450.........460
 
   783......790.........800.........810.........820.... .....830.....
Predicted Secondary structure 













.......
Query SS confidence 









































. . . . . . .










Query Sequence  LIEELSCAGPAKALRKLHGKCLSQLQPLPQTLQAWALLQLDG. . . . . . . PPRLCRAARTR
Query Conservation 

  
 
    
   

            
 
 

  

 
 .......   
  

   
Alig confidence 

























...












.......










Template Conservation 
               





 
  ...  
  
   
             

  

 
Template Sequence  LSQSSDRAKEEEIVLALKALGNAGQP. . . NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMA
Template Known Secondary structure  TT
T
G...GGTTSTTSSS



S
T
Template Predicted Secondary structure 





...








Template SS confidence 



























































   461........470.........480...... ...490.........500.........510.......
 
   836...840.........850.........860.........870...... ...880.........890. ..
Predicted Secondary structure 








.


.
Query SS confidence 








































.














.

Query Sequence  LASAARNKRFREKALLYYTNALNDSDAKVQQAACVALQQLG. GIESCEQIVSLCQSD. LE
Query Conservation 
         




      


 
   
 


 

  

.
 


  
  
  

. 
Alig confidence 








































.














.

Template Conservation 

      
  
   
  
  
  
  





   

 
 
    
  
   
  
 
 
Template Sequence  LRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESKPSVALVSMVAVRLRREPNL
Template Known Secondary structure  TTTGGGT

TTS
T


TT
S
Template Predicted Secondary structure 

















Template SS confidence 



























































   518.520.........530.........540.........550.........560.........570.......
 
   894.....900.........910.........920..
Predicted Secondary structure 
Query SS confidence 




























Query Sequence  AVRVAAREATLSFGEKGRLAFEKMDKLHS
Query Conservation   

 

 



  

 

 
   

    
Alig confidence 




























Template Conservation 

 


 
 
 

  
  
    

  
 
Template Sequence  QVASFVYSQMRSLSRSSNPEFRDVAAACS
Template Known Secondary structure  TT

SGGG
Template Predicted Secondary structure 




Template SS confidence 




























   578.580.........590.........600......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D