Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence60.03%DateTue Jul 30 12:55:19 BST 2013
Rank106Aligned Residues138
% Identity17%Templatec3vwaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytoplasmic export protein 1; PDBTitle: crystal structure of cex1p
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   782.......790.........800......... 810.........820.........830......
Predicted Secondary structure 









.....




Query SS confidence 



























. . . . .


























Query Sequence  TLIEELSCAGPAKALRKLHGKCLSQLQP. . . . . LPQTLQAWALLQLDGPPRLCRAARTRL
Query Conservation   

  
 
    
   

          .....  
 
 

  

 
    
  

   
Alig confidence 



























.....


























Template Conservation                                      
         
    

 
    
Template Sequence  HFIQGLTDSDATLRLQTLKTIPCIVSCLTERQLNNELLRFLAKTQVDSDVEIRTWTVIII
Template Known Secondary structure  GGG
SSGGG

TTT
SS
Template Predicted Secondary structure 










Template SS confidence 



























































   388.390.........400.........410.........420.........430.........440.......
 
   837..840. ........850. ........860.........870...... ...880...
Predicted Secondary structure 
....

.





........
Query SS confidence 




. . . .









.
























. . . . . . . .






Query Sequence  ASAAR. . . . NKRFREKALL. YYTNALNDSDAKVQQAACVALQQLG. . . . . . . . GIESCEQ
Query Conservation       ....    




 .     


 
   
 


 

  

........
 


  
Alig confidence 




....









.
























........






Template Conservation   

   
         

         
     

  
  
           

  


 
Template Sequence  SKISTILSTSVGNRSNILATAFTKSLKDPQVKPRLAALYGLEKSIELFDVNTIANKILTV
Template Known Secondary structure  GGGSSS
T
SSTGGGS
T
Template Predicted Secondary structure 








Template SS confidence 



























































   448.450.........460.........470.........480.........490.........500.......
 
   884.....890.........900.........910.........
Predicted Secondary structure 



Query SS confidence 



































Query Sequence  IVSLCQSDLEAVRVAAREATLSFGEKGRLAFEKMDK
Query Conservation 
  
  

 
 

 

 



  

 

 
   

 
Alig confidence 



































Template Conservation 
   
 
    

  
   
   
  

     
  
Template Sequence  IAPGLLDKSPIVRGRAKILFEEYLEKLEKEAQLIQT
Template Known Secondary structure  GGGGG
SS


Template Predicted Secondary structure 




Template SS confidence 



































   508.510.........520.........530.........540...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D