Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence20.35%DateTue Jul 30 12:55:19 BST 2013
Rank197Aligned Residues50
% Identity18%Templatec3i5qA_
PDB info PDB header:protein transportChain: A: PDB Molecule:nucleoporin nup170; PDBTitle: nup170(aa1253-1502) at 2.2 a, s.cerevisiae
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130.........140....
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Query Sequence  LREHLCEQQAELDYLCGRHTDTQRGSRLAFYYDLDKQLRLVERHIRKVEFHISKVDELYE
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Template Sequence  IQDACEVAGIQGDILSLVYTDARIDS. . . . . . . . . . . . AIKDELIKTLDGKILSTSELFN
Template Known Secondary structure  GGG
TTS
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   1262.......1270.........1280....... ..1290.........1300.........
 
   145.
Predicted Secondary structure 
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Query Sequence  AY
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Template Sequence  DF
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   1310.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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