Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence59.25%DateTue Jul 30 12:55:19 BST 2013
Rank108Aligned Residues128
% Identity16%Templatec1dvpA_
PDB info PDB header:transferaseChain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   768.770.........780.........790.........800.........810.........820.......
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Query Sequence  SDLEKHLAQLTKEVTLIEELSCAGPAKALRKLHGKCLSQLQPLPQTLQAWALLQLDGPPR
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Template Sequence  SSFCKNLENATSH. . . . . LRLEPDWPSILLICDEINQK. DVTPKNAFAAIKKKMNSPNPH
Template Known Secondary structure  S
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   4.....10...... ...20.........30...... ...40.........50.......
 
   828.830.........840.........850.........860.........870.........880.......
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Query Sequence  LCRAARTRLASAARNKRFREKALLYYTNALNDSDAKVQQAACVALQQLGGIESCEQIVSL
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Template Sequence  SSCYSLLVL. . . . . . . . . . . . . . . . . . . . . . . . ESIVKNCGAPVHEEVFTKENCEMFSSF
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   58.60...... ...70.........80.........90...
 
   888.890 .........900........ .910.........920.....
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Query Sequence  CQS. DLEAVRVAAREATLSFGE. . KGRLAFEKMDKLHSEQE
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Template Sequence  LESTPHENVRQKMLELVQTWAYAFRSSDKYQAIKDTMTILK
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   94.....100.........110.........120.........130....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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