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Job DescriptionA1L3T7
Confidence35.72%DateTue Jul 30 12:55:19 BST 2013
Rank135Aligned Residues203
% Identity17%Templatec3cwgA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: unphosphorylated mouse stat3 core fragment
Resolution3.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80........ .90.........100.........110.........120.....
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Query Sequence  QQVKKIFDALKRGLREH. . . . . . LCEQQAELDYLCGRHTDTQRGSRLAFYYDLDKQLRLV
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Template Sequence  QMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGGPPN. ICLDRLENWITSL
Template Known Secondary structure  TTTTTT
S

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   212.......220.........230.........240.........250....... ..260.........270
 
   126...130.........140.........150.........160.........170.........180.....
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Query Sequence  ERHIRKVEFHISKVDELYEAYCIQWRLRDGASNMQRAFSNSTQSRASRESLQELGRSLQE
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Template Sequence  AESQLQTRQQIKKLEELQQKVSYKG. . . . . . . . . . . . . . . . . . . DPIVQHRPMLEERIVE
Template Known Secondary structure  TTTTTTS

TT...................
TGGGT
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   271........280.........290..... ....300.........310.
 
   186...190.........200. ........210.........220.........230
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Query Sequence  CLEDMCLIEGTLEGHL. . . . . . . . . . . . . . . GEFQVKMKGLVGYARLCPGDQYEVLMRLG
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Template Sequence  LFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNYQLKIKVCIDKR
Template Known Secondary structure  T
TT
TT
TTTT

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TTTTT






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   312.......320.........330.........340.........350.........360.........370.
 
   231........240.........250.........260......... 270.........
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Query Sequence  RQRWRLKGRIEPDDSQTWDEEERVFVPTVHENLEIKVTE. . . . . . . . . . . LRGLSSMVVG
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Template Sequence  GSR. . . KFNILGTN. TKVMNMEENG. SLSAEFKHLTLREQRCIVTEELHLITFETEVYHQ
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   380.. .......390 .........400 .........410.........420.........430....
 
   280.........290.........300.
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Query Sequence  AVTCDVADFFMARPQLVVVDIT
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Template Sequence  GLKIDLET. . HSLPVVVISNIC
Template Known Secondary structure  S
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SSTT
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   449450...... ...460........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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