Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence96.46%DateTue Jul 30 12:55:19 BST 2013
Rank57Aligned Residues285
% Identity13%Templatec3nmzB_
PDB info PDB header:cell adhesion/cell cycleChain: B: PDB Molecule:apc variant protein; PDBTitle: crytal structure of apc complexed with asef
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   623......630.... .....640...... ...650.........660.....
Predicted Secondary structure 




.................




Query SS confidence 











. . . . . . .











. . . . . . . . . .


















Query Sequence  KALLQKLASPNL. . . . . . . SRMVEDCLLEEA. . . . . . . . . . VQQRQVLEVLSDLDLEQVS
Query Conservation    

  
 
 
 ....... 
     

  
..........  

 


 
  
      
Alig confidence 











.......











..........


















Template Conservation    

 

            
   
  

 

                  

  
      
Template Sequence  PLLIQLLHGNDKNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCET
Template Known Secondary structure  T








SSS
S
Template Predicted Secondary structure 


















Template SS confidence 



























































   354.....360.........370.........380.........390.........400.........410...
 
   666...670.........680.........690.........700.........710.........720.....
Predicted Secondary structure 















Query SS confidence 



























































Query Sequence  KARSVEEIIPQASHRKGGLALWQGCTQPGGVLACPASTLLSQLKKTFLHRVRGKYPGQLE
Query Conservation      
  

           

  
              
  
    
  
         
Alig confidence 
















........


































Template Conservation                   ........          
   
  
                 
Template Sequence  CWEWQEAHEPGMDQDKN. . . . . . . . PAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQ
Template Known Secondary structure  TSTTS


S
........



GGGTTTSTT
Template Predicted Secondary structure 



........






Template SS confidence 



























































   420.........430...... ...440.........450.........460.........470.
 
   726...730.........740.........750.........760.........770.........780.....
Predicted Secondary structure 















Query SS confidence 



























































Query Sequence  IVCRRLLEQVVGCGGLLVPAGLQEEQVVTWFQFHSYLQRQSISDLEKHLAQLTKEVTLIE
Query Conservation   
   

                     
 

  

     
  
     


 
  

 
Alig confidence 
























..
































Template Conservation   
  

                   ..  
   
  
                    
  
Template Sequence  AIAELLQVDCEMYGLTNDHYSITLR. . RYAGMALTNLTFGDVANKATLCSMKGCMRALVA
Template Known Secondary structure  STT


..TT

Template Predicted Secondary structure 







..







Template SS confidence 



























































   474.....480.........490........ .500.........510.........520.........530.
 
   786...790.........800.........810........ .820.........830.....
Predicted Secondary structure 










..........



Query SS confidence 
































. . . . . . . . . .
















Query Sequence  ELSCAGPAKALRKLHGKCLSQLQPLPQTLQAWA. . . . . . . . . . LLQLDGPPRLCRAARTR
Query Conservation   
 
    
   

            
 
 

 .......... 

 
    
  

   
Alig confidence 
































..........
















Template Conservation 

          
   
  
                    
   
               
Template Sequence  QLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSA
Template Known Secondary structure  GGG
S
TSS

TTTT

S
Template Predicted Secondary structure 















Template SS confidence 



























































   532.......540.........550.........560.........570.........580.........590.
 
   836...840..... ....850....... ..860.........870...
Predicted Secondary structure 


...........



...........
Query SS confidence 









. . . . . . .











. . . .















. . . . . . . . . . .
Query Sequence  LASAARNKRF. . . . . . . REKALLYYTNAL. . . . NDSDAKVQQAACVALQ. . . . . . . . . . .
Query Conservation 
         .......




      
....

 
   
 


 

 ...........
Alig confidence 









.......











....















...........
Template Conservation 
                       
   
                  
            
Template Sequence  LWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNED
Template Known Secondary structure  TTT
STTTT


SSSTTTT
Template Predicted Secondary structure 




















Template SS confidence 



























































   592.......600.........610.........620.........630.........640.........650.
 
   874.....880.........890.........900.........910.......
Predicted Secondary structure  ...






Query SS confidence  . . .











































Query Sequence  . . . QLGGIESCEQIVSLCQSDLEAVRVAAREATLSFGEKGRLAFEKM
Query Conservation  ... 


 


  
  
  

 
 

 

 



  

 

 
   
Alig confidence  ...











































Template Conservation            
  

 

      
   
  

 

          
Template Sequence  HRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEAL
Template Known Secondary structure  TTT
S
SSS
Template Predicted Secondary structure 








Template SS confidence 














































   652.......660.........670.........680.........690........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D