Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence97.53%DateTue Jul 30 12:55:19 BST 2013
Rank25Aligned Residues129
% Identity7%Templatec3w3zA_
PDB info PDB header:protein transport/nuclear proteinChain: A: PDB Molecule:importin subunit beta-3; PDBTitle: crystal structure of kap121p bound to rangtp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   781........790.........800.........810.........820. ........830.........
Predicted Secondary structure 










.



Query SS confidence 








































.

















Query Sequence  VTLIEELSCAGPAKALRKLHGKCLSQLQPLPQTLQAWALLQ. LDGPPRLCRAARTRLASA
Query Conservation    

  
 
    
   

            
 
 

  

. 
    
  

   
   
Alig confidence 








































.

















Template Conservation    

  
 
 
   
  
   
              
   
        
  
 
 
   
Template Sequence  LQIVQAFASPDNQIRSVAEKALSEEWENNIEYLLTFLAEQAAFSQDTTVAALSAVLFRKL
Template Known Secondary structure  TT
SS


S
S
Template Predicted Secondary structure 









Template SS confidence 



























































   13......20.........30.........40.........50.........60.........70..
 
   840. ........850....... ..860.........870....... ..880.......
Predicted Secondary structure 
.....

.






......
Query SS confidence 

. . . . .















.



















. . . . . .









Query Sequence  AR. . . . . NKRFREKALLYYTNAL. NDSDAKVQQAACVALQQLGG. . . . . . IESCEQIVSL
Query Conservation    .....    




      
.

 
   
 


 

  


...... 


  
  
Alig confidence 

.....















.



















......









Template Conservation                
   

  
       

      
  
       
 


  
   
Template Sequence  ALKITHIRKEVLAQIRSSLLKGFLSERADSIRHKLSDAIAECVQDDLPAWPELLQALIES
Template Known Secondary structure 

TTS
S


TT

TTS


Template Predicted Secondary structure 
















Template SS confidence 



























































   75....80.........90.........100.........110.........120.........130....
 
   888.890.........900.........
Predicted Secondary structure 



Query SS confidence 





















Query Sequence  CQSDLEAVRVAAREATLSFGEK
Query Conservation    

 
 

 

 



  

 
Alig confidence 





















Template Conservation             
   
  
   
Template Sequence  LKSGNPNFRESSFRILTTVPYL
Template Known Secondary structure  SS

GGG
Template Predicted Secondary structure 



Template SS confidence 





















   148.150.........160.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D