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Job Description | A1L3T7 | Confidence | 32.85% | Date | Tue Jul 30 12:55:19 BST 2013 |
Rank | 144 | Aligned Residues | 86 |
% Identity | 16% | Template | c1vsy5_ |
PDB info |
PDB header:hydrolase | Chain: 5: PDB Molecule:proteasome activator blm10; |
PDBTitle: proteasome activator complex
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Resolution | 3.00 Å |
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820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | Q | L | D | G | P | P | R | L | C | R | A | A | R | T | R | L | A | S | A | A | R | N | K | R | F | R | E | K | A | L | L | Y | Y | T | N | A | L | N | D | S | . |
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D | A | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | Y | N | E | Q | F | V | E | V | R | V | R | A | A | S | I | L | S | D | I | V | H | N | W | K | . |
E | E | Q | P | L | L | S | L | I | E | R | F | A | K | G | L | D | V | N | K | Y | T | S | K | E | R | Q | K | L | S | K | T | D | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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1998 | . | 2000 | . | . | . | . | . | . | . | . | . | 2010 | . | . | . | . | . | . | . | . | . | 2020 | . | . | |
. | . | . | . | . | . | . | 2030 | . | . | . | . | . | . | . | . | . | 2040 | . | . | . | . | . | . | . | . | . | 2050 | . | . | . | . | . | . |
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864 | . | . | . | . | . | 870 | . | . | . | . | . | . | |
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. | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | Q | Q | A | A | C | V | A | L | Q | Q | L | G | . |
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G | I | E | S | C | E | Q | I | V | S | L | C | Q | S | D | L | E | A | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | I | H | G | N | V | L | G | L | G | A | I | I | S | A | F | P | Y | V | F | P | L | P | P | W | I | P | K | N | L | S | N | L | S | S | W | A | R | T | S | G | M | T | G | N | A | A | K | N | T | I | S | E | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
2057 | . | . | 2060 | . | . | . | . | . | . | . | . | . | 2070 | . | . | . | . | . | . | . | . | . | 2080 | . | . | . | . | . | . | . | . | . | 2090 | . | . | . | . | . | . | . | . | . | 2100 | . | . | . | . | . | . | . | . | . | 2110 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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