Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence72.64%DateTue Jul 30 12:55:19 BST 2013
Rank91Aligned Residues109
% Identity18%Templatec2nsqA_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4-like protein; PDBTitle: crystal structure of the c2 domain of the human e3 ubiquitin-protein2 ligase nedd4-like protein
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200........ .210.........220.........230.........240.........
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Query Sequence  EGHLGEFQVKM. . . . . . . . KGLVGYARLCPGDQYEVLMRLGRQRWRLKGRIEPDDSQTWD
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Template Sequence  EGESRILRVKVVSGIDLAKKASDPYVKLSLYVA. . . . . DENRELALVQTKTIKKTLNPKW
Template Known Secondary structure  TTT
S






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   16...20.........30.........40........ .50.........60.........70
 
   250..... ....260.........270..... ....280.........290..... ....300...
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Query Sequence  EEERVF. VPTVHENLEIKVTELRGLSS. MVVGAVTCDVADFFMARPQL. VVVDITEL. . .
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Template Sequence  NEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPYTFKDFLLRPRSHK
Template Known Secondary structure 
TTT

SSS


TT

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   75....80.........90.........100.........110.........120.........130....
 
   304.....310.
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Query Sequence  . . . . GTIKLQLE
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Template Sequence  SRVKGFLRLKMA
Template Known Secondary structure  S



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   140.........150.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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