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Job DescriptionA1L3T7
Confidence97.49%DateTue Jul 30 12:55:19 BST 2013
Rank26Aligned Residues201
% Identity11%Templatec4k92B_
PDB info PDB header:structural proteinChain: B: PDB Molecule:clip-associating protein 1; PDBTitle: a cryptic tog domain with a distinct architecture underlies clasp-2 dependent bipolar spindle formation
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   724.....730.........740.........750.........760.........770.........780. .
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Query Sequence  LEIVCRRLLEQVVGCGGLLVPAGLQEEQVVTWFQFHSYLQRQSISDLEKHLAQLTKEV. T
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Template Sequence  SSRDLEESINKIREILSD. . DKHDWEQRVNALKKIRSLLL. AGAAEYDNFFQHLRLLDGA
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S..TTS
.TTGGGSTTTT
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   316...320.........330... ......340.........350... ......360.........370..
 
   783......790.........800.. .......810.........820.........830.....
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Query Sequence  LIEELSCAGPAKALRKLHGK. . . . . . . CLSQLQPLPQTLQAWALLQLDGPPRLCRAARTR
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Template Sequence  FKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIXPTIFNLIPNSAKIXATSGVVA
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GGGGTTTT
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   373......380.........390.........400.........410.........420.........430..
 
   836...840.........850.........860.........870..... ....880....
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Query Sequence  LASAARNKRFREKALLYYTNALNDSDAKVQQAACVALQQL. . . . . . . . . . . GGIESCEQI
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Template Sequence  VRLIIRHTHI. PRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETI
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.TTGGGG
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   433......440.. .......450.........460.........470.........480.........490.
 
   885....890.........900.........910.........920.........930.
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Query Sequence  VSLCQSDLEAVRVAAREATLSFGEKGRLAFEKMDKLHSEQEAFCQEA
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Template Sequence  KKGIHDADSEARIEARKCYWGFHS. . . HFSREAEHLYHTLESSYQKA
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   492.......500.........510..... ....520.........530.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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