Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3T7
Confidence96.62%DateTue Jul 30 12:55:19 BST 2013
Rank55Aligned Residues125
% Identity10%Templatec4a0cB_
PDB info PDB header:cell cycleChain: B: PDB Molecule:cullin-associated nedd8-dissociated protein 1; PDBTitle: structure of the cand1-cul4b-rbx1 complex
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   782.......790.........800.........810... ......820.........830...
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Query Sequence  TLIEELSCAGPAKALRKLHGKCLSQLQPLPQT. . . . . . . . LQAWALLQLDGPPRLCRAAR
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Template Sequence  NLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAV
Template Known Secondary structure  TTSSS
SS

S


STTS
S
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   10.........20.........30.........40.........50.........60.........
 
   834.....840. ........850.........860.........870........
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Query Sequence  TRLASAAR. . NKRFREKALLYYTNALNDSDAKVQQAACVALQQLGGI. . . . . . . . . . . . .
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Template Sequence  KCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPGSALAANVCK
Template Known Secondary structure  TSS
TTT
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   70.........80.........90.........100.........110.........120.........
 
   879880.........890.... .....900......
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Query Sequence  ESCEQIVSLCQSDLEA. VRVAAREATLSF
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Template Sequence  KITGRLTSAIAKQEDVSVQLEALDIMADM
Template Known Secondary structure  S
TTSTTS
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   133......140.........150.........160.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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