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Job DescriptionA1L3T7
Confidence95.43%DateTue Jul 30 12:55:19 BST 2013
Rank65Aligned Residues142
% Identity15%Templatec2qnaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:importin subunit beta-1; PDBTitle: crystal structure of human importin-beta (127-876) in complex with the2 ibb-domain of snurportin1 (1-65)
Resolution2.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   782.......790. ........800.........810... ......820. ........
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Query Sequence  TLIEELSCAG. . PAKALRKLHGKCLSQLQPLPQT. . . . . . . . LQAWALLQ. . LDGPPRLC
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Template Sequence  QLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVK
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   132.......140.........150.........160.........170.........180.........190.
 
   830.........840 .........850.........860.........870.......
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Query Sequence  RAARTRLASAA. . . . . . . RNKRFREKALLYYTNALNDSDAKVQQAACVALQQLGG. . . . .
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Template Sequence  LAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQY
Template Known Secondary structure  GGG
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   192.......200.........210.........220.........230.........240.........250.
 
   878.880.........890.........900.........910.........920...
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Query Sequence  . . . . . . IESCEQIVSLCQSDLEAVRVAAREATLSFGEKGRLAFEKMDKLHSE
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Template Sequence  METYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQ
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   252.......260.........270.........280.........290.........300...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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