Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.18%DateWed Jul 10 14:11:45 BST 2013
Rank192Aligned Residues97
% Identity14%Templatec2xtjB_
PDB info PDB header:hydrolase/antibodyChain: B: PDB Molecule:fab from a human monoclonal antibody, 1d05; PDBTitle: the crystal structure of pcsk9 in complex with 1d05 fab
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40... ......50.........60.........70.........80
Predicted Secondary structure 










.


















Query SS confidence 





















.




































Query Sequence  EVQLNVEWGGSIIIECPLPQLH. VRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTPC
Query Conservation          
      
      .  
  
                        
      
Alig confidence 





















.




































Template Conservation 
  
 
  
  


 
         
 
                                
Template Sequence  PSSLSASVGDRVTITCRASQGIRSALNWYQQKPGKAPKLLIYNGSTLQSGVPSRFSGSGS
Template Known Secondary structure 
S
TT

SS

TT

TTS

TTT
TT

TT
Template Predicted Secondary structure 



























Template SS confidence 



























































   8.10.........20.........30.........40.........50.........60.......
 
   81........90.........100......... 110.........120
Predicted Secondary structure 

















.



Query SS confidence 




























.










Query Sequence  LDKKLFLVEMTQLTENDDGIYACGVGMKT. DKGKTQKITLN
Query Conservation         
    
   
 
 
 
      .           
Alig confidence  ..


























.










Template Conservation  ..     
 
  
   


 
 
         
 

 
 

Template Sequence  . . GTDFTLTISSLQPEDFAVYYCQQFDGDPTFGQGTKVEIK
Template Known Secondary structure  ..TTSS

GGG
S
SSS




Template Predicted Secondary structure  ..
















Template SS confidence 








































   68.70.........80.........90.........100......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D