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Job DescriptionA1KXC4
Confidence99.18%DateWed Jul 10 14:11:45 BST 2013
Rank193Aligned Residues90
% Identity20%Templatec3upcJ_
PDB info PDB header:immune systemChain: J: PDB Molecule:heavy chain variable domain; PDBTitle: a general strategy for the generation of human antibody variable2 domains with increased aggregation resistance
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40. ........50.........60.. .......70.........80
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Query Sequence  WGGSIIIECPLPQ. . . LHVRMYLCRQMAKPGICSTVV. . . . . SNTFVKKEYERRVTLTPC
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Template Sequence  PGGSLRLSCAASGFTFSDEDMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRD
Template Known Secondary structure  TT


SS
GGG


TTS

SSS


TTTTTT
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   14.....20.........30.........40.........50.........60.........70...
 
   81........90.........100......... 110........
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Query Sequence  LDKKLFLVEMTQLTENDDGIYACGVGMKT. . . . DKGKTQKIT
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Template Sequence  NSKNTLYLQMNSLRAEDTAVYYCAKSYGAFDYWGQGTLVTVS
Template Known Secondary structure  TTTT
S

GGG
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   74.....80.........90.........100.........110.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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