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Job DescriptionA1KXC4
Confidence99.13%DateWed Jul 10 14:11:45 BST 2013
Rank340Aligned Residues105
% Identity13%Templatec1qseD_
PDB info PDB header:immune systemChain: D: PDB Molecule:protein (hman t-cell receptor); PDBTitle: structure of human a6-tcr bound to hla-a2 complexed with2 altered htlv-1 tax peptide v7r
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40... ......50.........60.........70.........80...
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Query Sequence  LNVEWGGSIIIECPLPQLH. VRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTPCLDK
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Template Sequence  LSVPEGAIASLNCTYSDRGSQSFFWYR. QYSGKSPELIMSIYSNGDKEDGRFTAQLNKAS
Template Known Secondary structure  TTS


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   10.........20.........30...... ...40.........50.........60........
 
   84.....90.........100.........110...... ...120.........130
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Query Sequence  KLFLVEMTQLTENDDGIYACGVGMKTDKGKTQK. . ITLNVHNEYPEPFW
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Template Sequence  QYVSLLIRDSQPSDSATYLCAVTTDSWGKLQFGAGTQVVVTPDIQNPDP
Template Known Secondary structure  T
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GGG
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   71........80.........90.........100.........110.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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