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Job Description | A1KXC4 | Confidence | 99.15% | Date | Wed Jul 10 14:11:45 BST 2013 |
Rank | 283 | Aligned Residues | 102 |
% Identity | 20% | Template | c3nn8C_ |
PDB info |
PDB header:immune system | Chain: C: PDB Molecule:engineered scfv, heavy chain; |
PDBTitle: crystal structure of engineered antibody fragment based on 3d5
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Resolution | 3.10 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | R | V | L | P | E | V | Q | L | N | V | E | W | G | G | S | I | I | I | E | C | P | L | . |
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F | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | Q | L | Q | Q | S | G | P | E | D | V | K | P | G | A | S | V | K | I | S | C | K | A | S | G | Y | S | L | S | T | S | G | M | G | V | N | W | V | K | Q | S | P | G | K | G | L | E | W | L | A | H | I | Y | W | D | D | D | K | R | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
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68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
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110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | K | E | Y | E | R | R | V | T | L | T | P | C | L | D | K | K | L | F | L | V | E | M | T | Q | L | T | E | N | D | D | G | I | Y | A | C | G | V | G | M | K | T | . |
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D | K | G | K | T | Q | K | I | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | P | S | L | K | S | R | A | T | L | T | V | D | K | T | S | S | T | V | Y | L | E | L | R | S | L | T | S | E | D | S | S | V | Y | Y | C | A | R | R | G | G | S | S | H | Y | Y | A | M | D | Y | W | G | Q | G | T | T | V | T | V | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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