Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.23%DateWed Jul 10 14:11:45 BST 2013
Rank109Aligned Residues91
% Identity12%Templatec2ol3A_
PDB info PDB header:immune systemChain: A: PDB Molecule:bm3.3 t-cell receptor alpha-chain; PDBTitle: crystal structure of bm3.3 scfv tcr in complex with pbm8-h-2kbm8 mhc2 class i molecule
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30......... 40.........50.........60.. .......70........
Predicted Secondary structure 






..












.







Query SS confidence 

















. .






















.















Query Sequence  EVQLNVEWGGSIIIECPL. . PQLHVRMYLCRQMAKPGICSTVV. SNTFVKKEYERRVTLT
Query Conservation          
      
  ..      
  
             .           
    
Alig confidence 

















..






















.















Template Conservation 
  
 
  
  


 
            
                          
    
Template Sequence  QTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLN
Template Known Secondary structure 
STT



B




SS

TT

TT
SS

TT
Template Predicted Secondary structure 


























Template SS confidence 



























































   7..10.........20.........30.........40.........50.........60......
 
   7980.........90.........100.........110..
Predicted Secondary structure 






















Query SS confidence 

































Query Sequence  PCLDKKLFLVEMTQLTENDDGIYACGVGMKTDKG
Query Conservation           
    
   
 
 
 
         
Alig confidence 

































Template Conservation          

 
      


 
 
 
       
Template Sequence  FQKPKSSIGLIITATQIEDSAVYFCAMRGDYGGS
Template Known Secondary structure 
BGGGTB


S

TTT

SSSS
Template Predicted Secondary structure 














Template SS confidence 

































   66...70.........80.........90.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D