Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.25%DateWed Jul 10 14:11:45 BST 2013
Rank77Aligned Residues100
% Identity21%Templated3bp5a1
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like)
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40. ........50.........60.. .......70..
Predicted Secondary structure 














..










.






Query SS confidence 

























. .




















.









Query Sequence  ALRVLPEVQLNVEWGGSIIIECPLPQ. . LHVRMYLCRQMAKPGICSTVV. SNTFVKKEYE
Query Conservation                
      
    ..    
  
             .          
Alig confidence 







.
















..




















.









Template Conservation   

  
  .
 
  
  


 
            
                         
Template Sequence  SLTFYPAW. LTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQD
Template Known Secondary structure 
SS.TT

S


TT

TT

TTSS
Template Predicted Secondary structure 



.























Template SS confidence 



























































   1....... .10.........20.........30.........40.........50.........
 
   73......80.........90.........100.........110......
Predicted Secondary structure 
























Query SS confidence 











































Query Sequence  RRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKTDKGKTQK
Query Conservation   
             
    
   
 
 
 
             
Alig confidence 











































Template Conservation   
            

 
  
   
 
 
 
 
           
Template Sequence  ARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPKAKIEE
Template Known Secondary structure  TT
TTSSSS

GGG

SSSS


Template Predicted Secondary structure 
















Template SS confidence 











































   60.........70.........80.........90.........100...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D