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Job DescriptionA1KXC4
Confidence99.12%DateWed Jul 10 14:11:45 BST 2013
Rank367Aligned Residues107
% Identity14%Templatec2ianS_
PDB info PDB header:immune systemChain: S: PDB Molecule:cd4+ t cell receptor e8 alpha chain; PDBTitle: structural basis for recognition of mutant self by a tumor-2 specific, mhc class ii-restricted tcr
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80
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Query Sequence  PEVQLNVEWGGSIIIECPLPQLHVRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTPC
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Template Sequence  SPPDLILQEGANSTLRCNFSDSVNNLQWFHQNPWGQ. . LINLFYIPSGTKQNGRLSATTV
Template Known Secondary structure  S
STT


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   6...10.........20.........30.........40. ........50.........60...
 
   81........90.........100.........110.... .....120.........
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Query Sequence  LDKKLFLVEMTQLTENDDGIYACGVGMKTDKGKT. . . . QKITLNVHNEYPEPF
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Template Sequence  ATERYSLLYISSSQTTDSGVYFCAALIQGAQKLVFGQGTRLTINPNIQNPDPA
Template Known Secondary structure  TTTTSS

GGG
SSS







SS


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   64.....70.........80.........90.........100.........110......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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