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Job DescriptionA1KXC4
Confidence99.24%DateWed Jul 10 14:11:45 BST 2013
Rank100Aligned Residues105
% Identity14%Templatec2ak4N_
PDB info PDB header:immune systemChain: N: PDB Molecule:sb27 t cell receptor alpha chain; PDBTitle: crystal structure of sb27 tcr in complex with hla-b*3508-2 13mer peptide
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30......... 40.........50.........60..... ....70.........80
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Query Sequence  QLNVEWGGSIIIECPL. . PQLHVRMYLCRQMAKPGICSTVVSNT. FVKKEYERRVTLTPC
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Template Sequence  EISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQ
Template Known Secondary structure  TT




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   910.........20.........30.........40.........50.........60........
 
   81........90.........100.........110...... ...120........
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Query Sequence  LDKKLFLVEMTQLTENDDGIYACGVGMKTDKGKTQK. . . ITLNVHNEYPEP
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Template Sequence  KSTSSFNFTITASQVVDSAVYFCALSGFYNTDKLIFGTGTRLQVFPNIQNP
Template Known Secondary structure  TTTTSS

GGG

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   68.70.........80.........90.........100.........110........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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