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Job DescriptionA1KXC4
Confidence99.15%DateWed Jul 10 14:11:45 BST 2013
Rank283Aligned Residues102
% Identity20%Templatec3nn8C_
PDB info PDB header:immune systemChain: C: PDB Molecule:engineered scfv, heavy chain; PDBTitle: crystal structure of engineered antibody fragment based on 3d5
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30......... 40.........50.........60..... ..
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Query Sequence  LRVLPEVQLNVEWGGSIIIECPL. . . . . PQLHVRMYLCRQMAKPGICSTVVSNT. . . . FV
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Template Sequence  VQLQQSGPEDVKPGASVKISCKASGYSLSTSGMGVNWVKQSPGKGLEWLAHIYWDDDKRY
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   2.......10.........20.........30.........40.........50.........60.
 
   68.70.........80.........90.........100......... 110........
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Query Sequence  KKEYERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKT. . . . . . . . . DKGKTQKIT
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Template Sequence  NPSLKSRATLTVDKTSSTVYLELRSLTSEDSSVYYCARRGGSSHYYAMDYWGQGTTVTVS
Template Known Secondary structure 
GGGTT
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GGG


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   62.......70.........80.........90.........100.........110.........120.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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