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Job DescriptionA1KXC4
Confidence99.12%DateWed Jul 10 14:11:45 BST 2013
Rank355Aligned Residues83
% Identity19%Templatec4hgkC_
PDB info PDB header:immune systemChain: C: PDB Molecule:shark v-nar antibody; PDBTitle: shark ignar variable domain
Resolution3.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40 .........50.........60.........70........
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Query Sequence  EVQLNVEWGGSIIIECPLP. . . QLHVRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLT
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Template Sequence  PRTATRETGESLTINCVLTDTSYPLYSTYWYRKNPGSSNKEQ. . . . . . . . ISISGRYVES
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   26...30.........40.........50.........60....... ..70.......
 
   7980.........90.........100.........110..
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Query Sequence  PCLDKKLFLVEMTQLTENDDGIYACGVGMKTDKG
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Template Sequence  VNKGTKSFSLRIKDLTVADSATYICRAMGTNIWT
Template Known Secondary structure  TTTTSS

GGG
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   78.80.........90.........100.........110.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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