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Job DescriptionA1KXC4
Confidence99.07%DateWed Jul 10 14:11:45 BST 2013
Rank492Aligned Residues98
% Identity19%Templatec4idlA_
PDB info PDB header:immune systemChain: A: PDB Molecule:single domain antibody vhh a9; PDBTitle: low melting temperature anti-cholera toxin llama vhh domain
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40 .........50.........60.........70..
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Query Sequence  LRVLPEVQLNVEWGGSIIIECPLP. . . QLHVRMYLCRQMAKPGICSTVVSNTFVKKEYE.
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Template Sequence  VQLQQSGGGAVQTGGSLKLTCLASGNTASIRAMGWYRRAPGKQREWVASLTTTGTADYGD
Template Known Secondary structure 

TT

SGGG
TTS

TT


T
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   2.......10.........20.........30.........40.........50.........60.
 
   73......80.........90.........100..... ....110...
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Query Sequence  . . . RRVTLTPCLDKKLFLVEMTQLTENDDGIYACGV. . . . . . . . . . . . . . . . GMKTDKGK
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Template Sequence  FVKGRFTISRDNANNAATLQMDSLKPEDTAVYYCNADGRRFDGARWREYESWG. . . . QGT
Template Known Secondary structure  TTTT
TTTT
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GGG

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   62.......70.........80.........90.........100.........110.... ...
 
   114....
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Query Sequence  TQKIT
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Template Sequence  QVTIS
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   118.120..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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