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Job DescriptionA1KXC4
Confidence99.15%DateWed Jul 10 14:11:45 BST 2013
Rank272Aligned Residues104
% Identity17%Templatec4b50A_
PDB info PDB header:immune systemChain: A: PDB Molecule:2h10 llama vhh; PDBTitle: crystal structure of the hiv-1 gp41 mper-specific llama vhh 2h10
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40. ........50.........60.........
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Query Sequence  LRVLPEVQLNVEWGGSIIIECPLPQ. . . LHVRMYLCRQMAKPGICSTVVSNTFVKK. . . .
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Template Sequence  VQLVESGGGLVQPGGSLRLSCAASGSISSVDVMSWYRQAPGKQRELVAFITDRGRTNYKV
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G
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   2.......10.........20.........30.........40.........50.........60.
 
   70.........80.........90.........100.........110.........120
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Query Sequence  EYERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKTDKGKTQKITLN
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Template Sequence  SVKGRFTISRDNSKNMVYLQMNSLKPEDTADYLCRAESRTSWSSPSPLDVW
Template Known Secondary structure  GGBTTTTTT
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GGG



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   62.......70.........80.........90.........100.........110..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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