Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.25%DateWed Jul 10 14:11:45 BST 2013
Rank84Aligned Residues102
% Identity17%Templated1u6ah1
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like)
Resolution2.81

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40. ........50.........60...... ...
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Query Sequence  LRVLPEVQLNVEWGGSIIIECPLPQ. . . LHVRMYLCRQMAKPGICSTVVSNTF. . . . VKK
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Template Sequence  VQLQESGPGLVKPSETLSLTCTVSGGSISSHYWSWIRQSPGKGLQWIGYIYYSGSTNYSP
Template Known Secondary structure 


S
TT

SS
STTS
TTS
TTS

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   2.......10.........20.........30.........40.........50.........60.
 
   70.........80.........90.........100......... 110.......
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Query Sequence  EYERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKT. . . . . . . . . . . . DKGKTQKI
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Template Sequence  SLKSRVTISVETAKNQFSLKLTSMTAADTAVYYCARGPVPAVFYGDYRLDPWGQGTLVTV
Template Known Secondary structure  TTTTTT
S

GGG

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SB


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   62.......70.........80.........90.........100.........110.........120.
 
   118
Predicted Secondary structure 
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Query Sequence  T
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Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   112
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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