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Job DescriptionA1KXC4
Confidence99.31%DateWed Jul 10 14:11:45 BST 2013
Rank44Aligned Residues102
% Identity17%Templatec1yc7B_
PDB info PDB header:immune systemChain: B: PDB Molecule:anti-vsg immunoglobulin heavy chain variable PDBTitle: caban33 vhh fragment against vsg
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40. ........50.........60....... ..70.
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Query Sequence  LRVLPEVQLNVEWGGSIIIECPLPQ. LHVRMYLCRQMAKPGICSTVVSNTFV. . . . KKEY
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Template Sequence  VQLVESGGGSVQAGGSLRLSCAVSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSV
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   2.......10.........20.........30.........40.........50.........60.
 
   72.......80.........90.........100.........110 ........
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Query Sequence  ERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKTD. . . . . . . KGKTQKIT
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Template Sequence  KGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQCGVRSIREYWGQGTQVTVS
Template Known Secondary structure  TTT
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   64.....70.........80.........90.........100.........110.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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