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Job DescriptionA1KXC4
Confidence99.13%DateWed Jul 10 14:11:45 BST 2013
Rank343Aligned Residues97
% Identity12%Templatec3iy7A_
PDB info PDB header:immune systemChain: A: PDB Molecule:fragment from neutralizing antibody f (light PDBTitle: variable domains of the computer generated model (wam) of2 fab f fitted into the cryoem reconstruction of the virus-3 fab f complex
Resolution14.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40..... ....50.........60.........70.........80
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Query Sequence  EVQLNVEWGGSIIIECPLPQLHVR. MYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTPC
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Template Sequence  PSLLSASVGDRVTLNCKASHNINKNLEWYQQKLGEAPKLLIYYANNLQTGISSRFSGSGS
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   6...10.........20.........30.........40.........50.........60.....
 
   81........90.........100......... 110.........120
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Query Sequence  LDKKLFLVEMTQLTENDDGIYACGVGMKT. DKGKTQKITLN
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Template Sequence  . . GTDYTLTISSLQPEDVATYYCYQYNSGHTFGAGTKLELK
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GGG
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   66...70.........80.........90.........100....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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