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Job DescriptionA1KXC4
Confidence99.09%DateWed Jul 10 14:11:45 BST 2013
Rank438Aligned Residues109
% Identity15%Templatec3gsnA_
PDB info PDB header:immune systemChain: A: PDB Molecule:ra14 tcr alpha chain (trav24, traj49); PDBTitle: crystal structure of the public ra14 tcr in complex with the2 hcmv dominant nlv/hla-a2 epitope
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40. ........50.........60.........70.........80
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Query Sequence  EVQLNVEWGGSIIIECPLPQ. LHVRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTPC
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Template Sequence  PQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLN
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   8.10.........20.........30.........40.........50.........60.......
 
   81........90.........100.........110.........120.........130
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Query Sequence  LDKKLFLVEMTQLTENDDGIYACGVGMKTDKGKTQKITLNVHNEYPEPFW
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Template Sequence  TKEGYSYLYIKGSQPEDSATYLCARNTGNQFYFGTGTSLTVIPNIQNPDP
Template Known Secondary structure  TTTTBSS

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   68.70.........80.........90.........100.........110.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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