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Job DescriptionA1KXC4
Confidence99.08%DateWed Jul 10 14:11:45 BST 2013
Rank460Aligned Residues98
% Identity13%Templatec3u6rL_
PDB info PDB header:immune systemChain: L: PDB Molecule:antibody 1:7 (light chain); PDBTitle: three dimensional structure of broadly neutralizing anti - hepatitis c2 virus (hcv) glycoprotein e2 single chain fv fragment 1:7
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40... ......50.........60.........70.........
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Query Sequence  PEVQLNVEWGGSIIIECPLPQLH. VRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTP
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Template Sequence  SPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSG
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   155....160.........170.........180.........190.........200.........210....
 
   80.........90.........100........ .110.........120
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Query Sequence  CLDKKLFLVEMTQLTENDDGIYACGVGMK. TDKGKTQKITLN
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Template Sequence  S. . GTDFTLTISNLEPEDFAVYYCQQRSDWVTFGGGTKVEIK
Template Known Secondary structure  ..TT
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   215 ....220.........230.........240.........250....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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