Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.25%DateWed Jul 10 14:11:45 BST 2013
Rank80Aligned Residues104
% Identity17%Templated1mh5b1
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like)
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40. ........50.........60...... ..
Predicted Secondary structure 













...













.....

Query SS confidence 
























. . .
























. . . . .

Query Sequence  LRVLPEVQLNVEWGGSIIIECPLPQ. . . LHVRMYLCRQMAKPGICSTVVSNTF. . . . . VK
Query Conservation               
      
    ...    
  
                 .....  
Alig confidence 
























...
























.....

Template Conservation 
 
 
     
  
 



 
  
          
  
                      
Template Sequence  VQLQQPGAELVKPGASVKLSCKASGYTFTSNWINWVKQRPGQGLEWIGNIYPDSYRTNYN
Template Known Secondary structure 


S
TT

SS
GGG
TTS

TTTT
Template Predicted Secondary structure 



























Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   6970.........80.........90.........100.........110..... ....120
Predicted Secondary structure 


























.....
Query SS confidence 














































. . . . .




Query Sequence  KEYERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKTDKGKTQ. . . . . KITLN
Query Conservation       
             
    
   
 
 
 
            .....     
Alig confidence 














































.....




Template Conservation       
             
 
      


 
 

           

 

 
 

Template Sequence  EKFKRKATLTVDTSSSTAYMQLSSLTSDDSAVYYCVRKHYSYDGVVYWGQGTLVTVS
Template Known Secondary structure  GGGTTTTTTT
S

GGG
SS
SS




Template Predicted Secondary structure 























Template SS confidence 
























































   61........70.........80.........90.........100.........110.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D