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Job Description | A1KXC4 | Confidence | 99.07% | Date | Wed Jul 10 14:11:45 BST 2013 |
Rank | 491 | Aligned Residues | 107 |
% Identity | 18% | Template | c2vlrD_ |
PDB info |
PDB header:immune system | Chain: D: PDB Molecule:jm22 tcr alpha chain; |
PDBTitle: the structural dynamics and energetics of an immunodominant2 t-cell receptor are programmed by its vbeta domain
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Resolution | 2.3 Å |
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22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | V | Q | L | N | V | E | W | G | G | S | I | I | I | E | C | P | L | P | Q | L | H | V | R | M | Y | L | C | R | Q | M | A | K | P | G | I | C | S | T | V | V | S | N | T | F | V | K | K | E | Y | E | R | R | V | T | L | T | P | C | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | Q | F | L | S | I | Q | E | G | E | N | L | T | V | Y | C | N | S | S | S | V | F | S | S | L | Q | W | Y | R | Q | E | P | G | E | G | P | V | L | L | V | T | V | V | T | G | G | E | V | K | K | L | K | R | L | T | F | Q | F | G | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
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. | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | K | K | L | F | L | V | E | M | T | Q | L | T | E | N | D | D | G | I | Y | A | C | G | V | G | M | K | T | D | K | G | K | T | . |
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Q | K | I | T | L | N | V | H | N | E | Y | P | E | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | R | K | D | S | S | L | H | I | T | A | A | Q | P | G | D | T | G | L | Y | L | C | A | G | A | G | S | Q | G | N | L | I | F | G | K | G | T | K | L | S | V | K | P | N | I | Q | N | P | D | P |
Template Known Secondary structure |   |
T | S | S |  |  |  |  |  |  | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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