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Job Description | A1KXC4 | Confidence | 99.08% | Date | Wed Jul 10 14:11:45 BST 2013 |
Rank | 460 | Aligned Residues | 98 |
% Identity | 13% | Template | c3u6rL_ |
PDB info |
PDB header:immune system | Chain: L: PDB Molecule:antibody 1:7 (light chain); |
PDBTitle: three dimensional structure of broadly neutralizing anti - hepatitis c2 virus (hcv) glycoprotein e2 single chain fv fragment 1:7
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Resolution | 2.67 Å |
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21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | E | V | Q | L | N | V | E | W | G | G | S | I | I | I | E | C | P | L | P | Q | L | H | . |
V | R | M | Y | L | C | R | Q | M | A | K | P | G | I | C | S | T | V | V | S | N | T | F | V | K | K | E | Y | E | R | R | V | T | L | T | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | P | A | T | L | S | L | S | P | G | E | R | A | T | L | S | C | R | A | S | Q | S | V | N | K | Y | L | A | W | Y | Q | Q | K | P | G | Q | A | P | R | L | L | I | Y | D | A | S | N | R | A | T | G | I | P | A | R | F | S | G | S | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | L | D | K | K | L | F | L | V | E | M | T | Q | L | T | E | N | D | D | G | I | Y | A | C | G | V | G | M | K | . |
T | D | K | G | K | T | Q | K | I | T | L | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | . |
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G | T | D | F | T | L | T | I | S | N | L | E | P | E | D | F | A | V | Y | Y | C | Q | Q | R | S | D | W | V | T | F | G | G | G | T | K | V | E | I | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
215 | |
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. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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