Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.11%DateWed Jul 10 14:11:45 BST 2013
Rank403Aligned Residues102
% Identity18%Templated1fbih1
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like)
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40..... ....50.........60.........70.
Predicted Secondary structure 
















...














..
Query SS confidence 




























. . .

























. .
Query Sequence  LRVLPEVQLNVEWGGSIIIECPLPQLHVR. . . MYLCRQMAKPGICSTVVSNTFVKKEY. .
Query Conservation               
      
        ...
  
                      ..
Alig confidence 




























...

























..
Template Conservation    
 
     
  
  


 
  
          
  
  
     
             
Template Sequence  VQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYN
Template Known Secondary structure 


B

S
TTS


SS
GGGS

TTS
TTTT
Template Predicted Secondary structure 





























Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   72.......80.........90.........100.........110 ........
Predicted Secondary structure  ...





















..........


Query SS confidence  . . .






































. . . . . . . . . .







Query Sequence  . . . ERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKTD. . . . . . . . . . KGKTQKIT
Query Conservation  ...  
             
    
   
 
 
 
       ..........        
Alig confidence  ...






































..........







Template Conservation       
             
 
      


 



              

 

 
 

Template Sequence  EKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVS
Template Known Secondary structure  GGGBTTGGGT
S

TTS


SS
GGG






Template Predicted Secondary structure 

























Template SS confidence 



























































   62.......70.........80.........90.........100.........110.........120.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D