Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.10%DateWed Jul 10 14:11:45 BST 2013
Rank419Aligned Residues107
% Identity18%Templated1nmbh_
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like)
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40. ........50.........60....... .
Predicted Secondary structure 













...














.....
Query SS confidence 
























. . .

























. . . . .
Query Sequence  LRVLPEVQLNVEWGGSIIIECPLPQ. . . LHVRMYLCRQMAKPGICSTVVSNTFV. . . . . K
Query Conservation               
      
    ...    
  
                  ..... 
Alig confidence 
























...

























.....
Template Conservation 
 



    
  
  


 
  
          
  
                      
Template Sequence  VQLQQPGAELVKPGASVRMSCKASGYTFTNYNMYWVKQSPGQGLEWIGIFYPGNGDTSYN
Template Known Secondary structure 


S
TT
SS
GGGS
TTTTTTT
Template Predicted Secondary structure 

























Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   6970.........80.........90.........100......... 110....... ..120..
Predicted Secondary structure 






















.



.....

Query SS confidence 








































.







. . . . .




Query Sequence  KEYERRVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKT. DKGKTQKI. . . . . TLNVH
Query Conservation       
             
    
   
 
 
 
      .        .....     
Alig confidence 








































.







.....




Template Conservation       
             
 
  
   


 
 
               

 

 
 
 
Template Sequence  QKFKDKATLTADKSSNTAYMQLSSLTSEDSAVYYCARSGGSYRYDGGFDYWGQGTTLTVS
Template Known Secondary structure  GGGTTTTTTTS

GGG
TTTTSS
S




Template Predicted Secondary structure 




























Template SS confidence 



























































   61........70.........80.........90.........100.........110.........120
 
   123
Predicted Secondary structure 
Query SS confidence 
Query Sequence  N
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   113
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D