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Job Description | A1KXC4 | Confidence | 99.11% | Date | Wed Jul 10 14:11:45 BST 2013 |
Rank | 380 | Aligned Residues | 108 |
% Identity | 16% | Template | c2p5eD_ |
PDB info |
PDB header:immune system | Chain: D: PDB Molecule:t-cell receptor, alpha chain; |
PDBTitle: crystal structures of high affinity human t-cell receptors bound to2 pmhc reveal native diagonal binding geometry
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Resolution | 1.89 Å |
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Query Sequence |   |
E | V | Q | L | N | V | E | W | G | G | S | I | I | I | E | C | P | L | . |
P | Q | L | H | V | R | M | Y | L | C | R | Q | M | A | K | P | G | I | C | S | T | V | V | S | N | T | F | V | K | K | E | Y | E | R | R | V | T | L | T | P | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | A | A | L | S | V | P | E | G | E | N | L | V | L | N | C | S | F | T | D | S | A | I | Y | N | L | Q | W | F | R | Q | D | P | G | K | G | L | T | S | L | L | L | I | T | P | W | Q | R | E | Q | T | S | G | R | L | N | A | S | L | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
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81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | D | K | K | L | F | L | V | E | M | T | Q | L | T | E | N | D | D | G | I | Y | A | C | G | V | G | M | K | T | D | . |
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K | G | K | T | Q | K | I | T | L | N | V | H | N | E | Y | P | E | P | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | S | S | G | S | S | T | L | Y | I | A | A | S | Q | P | G | D | S | A | T | Y | L | C | A | V | R | P | L | L | D | G | T | Y | I | P | T | F | G | R | G | T | S | L | I | V | H | P | Y | I | Q | N | P | D | P | A |
Template Known Secondary structure |   |
S | S | T | T |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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