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Job Description | A1KXC4 | Confidence | 99.11% | Date | Wed Jul 10 14:11:45 BST 2013 |
Rank | 385 | Aligned Residues | 97 |
% Identity | 14% | Template | c1zglQ_ |
PDB info |
PDB header:immune system | Chain: Q: PDB Molecule:t cell receptor alpha chain; |
PDBTitle: crystal structure of 3a6 tcr bound to mbp/hla-dr2a
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Resolution | 2.80 Å |
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25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | N | V | E | W | G | G | S | I | I | I | E | C | P | L | P | Q | L | H | V | R | . |
M | Y | L | C | R | Q | M | A | K | P | G | I | C | S | T | V | V | S | N | T | F | V | K | K | E | Y | E | R | R | V | T | L | T | P | C | L | D | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | T | L | S | E | E | A | F | L | T | I | N | C | T | Y | T | A | T | G | Y | P | S | L | F | W | Y | V | Q | Y | P | G | E | G | L | Q | L | L | L | K | A | T | K | A | D | D | K | G | S | N | K | G | F | E | A | T | Y | R | K | E | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
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84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | L | F | L | V | E | M | T | Q | L | T | E | N | D | D | G | I | Y | A | C | G | V | G | M | K | T | D | K | G | K | T | Q | K | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | S | F | H | L | E | K | G | S | V | Q | V | S | D | S | A | V | Y | F | C | A | L | S | G | G | D | S | S | Y | K | L | I | F | G | S | G | T | R | L | L | V |
Template Known Secondary structure |   |
T | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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