Return to main results Retrieve Phyre Job Id

Job DescriptionA1KXC4
Confidence99.15%DateWed Jul 10 14:11:45 BST 2013
Rank292Aligned Residues101
% Identity15%Templated1r0al1
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40... ......50.........60.........70...
Predicted Secondary structure 

















.
















Query SS confidence 




























.





























Query Sequence  GALRVLPEVQLNVEWGGSIIIECPLPQLH. VRMYLCRQMAKPGICSTVVSNTFVKKEYER
Query Conservation                 
      
      .  
  
                        
Alig confidence 




























.





























Template Conservation 
  
 
 
    
  
  
 
 
           
                         
Template Sequence  DIQMTQTTSSLSASLGDRVTISCSASQDISSYLNWYQQKPEGTVKLLIYYTSSLHSGVPS
Template Known Secondary structure 



B




TT


SS

TT

SS

TTT
TTS
T
Template Predicted Secondary structure 



























Template SS confidence 



























































   1........10.........20.........30.........40.........50.........60
 
   74.....80.........90.........100......... 110.......
Predicted Secondary structure 



















....



Query SS confidence 



































. . . .







Query Sequence  RVTLTPCLDKKLFLVEMTQLTENDDGIYACGVGMKT. . . . DKGKTQKI
Query Conservation 
             
    
   
 
 
 
      ....        
Alig confidence 






..


























....







Template Conservation         ..     
 
  
   


 
 
          
 

 
 
Template Sequence  RFSGSGS. . GTDYSLTISNLEPEDIATYYCQQYSKFPWTFGGGTKLEI
Template Known Secondary structure  T..TTSS

TTT
S
SSSS



Template Predicted Secondary structure  ..












Template SS confidence 















































   61...... ..70.........80.........90.........100......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D