 |
Job Description | A1KXC4 | Confidence | 99.12% | Date | Wed Jul 10 14:11:45 BST 2013 |
Rank | 375 | Aligned Residues | 98 |
% Identity | 12% | Template | d1um5l1 |
SCOP info | Immunoglobulin-like beta-sandwich
| Immunoglobulin
| V set domains (antibody variable domain-like)
|
Resolution | 1.60 |
|
 |
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | Q | L | N | V | E | W | G | G | S | I | I | I | E | C | P | L | P | Q | L | H | . |
V | R | M | Y | L | C | R | Q | M | A | K | P | G | I | C | S | T | V | V | S | N | T | F | V | K | K | E | Y | E | R | R | V | T | L | T | P | C |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   | . |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | S | S | L | S | A | S | L | G | E | R | V | S | L | T | C | R | A | S | Q | E | I | S | G | Y | L | Y | W | L | Q | Q | K | P | D | G | T | I | K | R | L | I | Y | A | G | S | T | L | D | S | G | V | P | K | R | F | S | G | S | R | S |
Template Known Secondary structure |   |
| S |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  | S | S |
|
| T | T |
|  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  | T | T | T |  |  |
| T | T | S |
| T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | K | K | L | F | L | V | E | M | T | Q | L | T | E | N | D | D | G | I | Y | A | C | G | V | G | M | K | T | D | K | G | K | T | Q | K | I | T | L | N | V |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
Template Sequence |   |
G | S | D | . |
. |
Y | S | L | T | I | S | S | L | E | S | E | D | F | A | D | Y | Y | C | L | Q | Y | A | S | Y | P | R | T | F | G | G | G | T | K | V | E | I |
Template Known Secondary structure |   |
T | T |  | . | . |  |  |  |  |  | S | S |
|
| G | G | G |
|  |  |  |  |  |  |  |
| S | S | S | S |
|  |  |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|