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Job DescriptionA1KXC4
Confidence99.11%DateWed Jul 10 14:11:45 BST 2013
Rank380Aligned Residues108
% Identity16%Templatec2p5eD_
PDB info PDB header:immune systemChain: D: PDB Molecule:t-cell receptor, alpha chain; PDBTitle: crystal structures of high affinity human t-cell receptors bound to2 pmhc reveal native diagonal binding geometry
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30......... 40.........50.........60.........70.........80
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Query Sequence  EVQLNVEWGGSIIIECPL. PQLHVRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTPC
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Template Sequence  PAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLITPWQREQTSGRLNASLD
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   8.10.........20.........30.........40.........50.........60.......
 
   81........90.........100.........110 .........120.........
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Query Sequence  LDKKLFLVEMTQLTENDDGIYACGVGMKTD. . . . . . KGKTQKITLNVHNEYPEPF
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Template Sequence  KSSGSSTLYIAASQPGDSATYLCAVRPLLDGTYIPTFGRGTSLIVHPYIQNPDPA
Template Known Secondary structure  SSTT
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GGG
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   68.70.........80.........90.........100.........110.........120..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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