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Job DescriptionA1KXC4
Confidence99.07%DateWed Jul 10 14:11:45 BST 2013
Rank491Aligned Residues107
% Identity18%Templatec2vlrD_
PDB info PDB header:immune systemChain: D: PDB Molecule:jm22 tcr alpha chain; PDBTitle: the structural dynamics and energetics of an immunodominant2 t-cell receptor are programmed by its vbeta domain
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.
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Query Sequence  EVQLNVEWGGSIIIECPLPQLHVRMYLCRQMAKPGICSTVVSNTFVKKEYERRVTLTPCL
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Template Sequence  PQFLSIQEGENLTVYCNSSSVFSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGD
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   910.........20.........30.........40.........50.........60........
 
   82.......90.........100.........110.... .....120........
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Query Sequence  DKKLFLVEMTQLTENDDGIYACGVGMKTDKGKT. . . QKITLNVHNEYPEP
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Template Sequence  ARKDSSLHITAAQPGDTGLYLCAGAGSQGNLIFGKGTKLSVKPNIQNPDP
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   6970.........80.........90.........100.........110........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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