Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUP1
Confidence8.75%DateWed Jul 10 14:15:27 BST 2013
Rank60Aligned Residues10
% Identity40%Templatec4gfhA_
PDB info PDB header:isomerase/dnaChain: A: PDB Molecule:dna topoisomerase 2; PDBTitle: topoisomerase ii-dna-amppnp complex
Resolution4.41 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   433......440..
Predicted Secondary structure 





Query SS confidence 









Query Sequence  RAIPTWRQGI
Query Conservation 
     
   
Alig confidence 









Template Conservation 



 
 


Template Sequence  RSIPNVLDGF
Template Known Secondary structure  S
BTTT

Template Predicted Secondary structure 






Template SS confidence 









   690.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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