Job Description A0AUP1 Confidence 35.32% Date Wed Jul 10 14:15:27 BST 2013 Rank 25 Aligned Residues 134 % Identity 11% Template c4a7fB_ PDB info PDB header:structural protein/hydrolase Chain: B: PDB Molecule:tropomyosin 1 alpha; PDBTitle: structure of the actin-tropomyosin-myosin complex (rigor atm 3) Resolution 7.70 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	I	H	N	N	V	K	K	L	Q	N	Q	L	K	D	V	K	P	T	P	D	V	V	E	K	L	R	E	M	M	E	E	I	E	N	A	I	N	T	F	K	E	E	Q	R	L	I	Y	E	E	L	I	Q	E	E	K	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	R	A	Q	E	R	L	A	T	A	L	Q	K	L	E	E	A	E	K	A	A	D	E	S	E	R	G	M	K	V	I	E	S	R	A	Q	K	D	E	E	K	M	E	I	Q	E	I	Q	L	K	E	A	K	H	I	A	E	D	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	E	L	S	A	V	S	R	R	I	E	S	W	A	L	G	N	S	E	T	E	K	A	F	R	A	I	S	S	K	V	P	V	D	R	V	T	Q	R	T	L	P	E	Q	V	V	E	F	E	K	F	L	Q	Q	T	G	G	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	K	Y	E	E	V	A	R	K	L	V	I	I	E	S	D	L	E	R	A	E	E	R	A	E	L	S	E	G	K	C	A	E	L	E	E	E	L	K	T	V	T	N	N	L	K	S	L	E	A	Q	A	E	K	Y	S	Q	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	W	D	A	L	D	H	Q	N	F	V	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	Y	E	E	E	I	K	V	L	S	D	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D