Job Description A0AUP1 Confidence 14.69% Date Wed Jul 10 14:15:27 BST 2013 Rank 38 Aligned Residues 182 % Identity 9% Template c3vkgA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain Resolution 2.81 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		K	D	K	H	S	H	F	Y	N	Q	R	G	D	F	R	T	.	.	.	E	Y	N	M	L	E	E	L	E	N	K	L	I	N	S	R	K	T	E	R	A	K	I	Q	Q	Q	L	A	K	I	H	N	N	V	K	K	L	Q	N	Q	L
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		N	E	K	R	D	Q	L	E	E	E	Q	L	H	L	N	I	G	L	K	K	L	R	D	T	E	A	Q	V	K	D	L	Q	V	S	L	A	Q	K	N	R	E	L	D	V	K	N	E	Q	A	N	Q	K	L	K	Q	M	V	Q	D	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3272	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290	.	.	.	.	.	.	.	.	.	3300	.	.	.	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.	.	.	3330	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		K	D	V	K	P	T	P	D	V	V	E	K	L	R	E	M	M	E	E	I	E	N	A	I	N	T	F	K	E	E	.	.	.	.	.	.	Q	R	L	I	Y	E	E	L	I	Q	E	E	K	T	T	N	N	E	L	S	A	V	S	R
Query Conservation																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	A	E	I	K	Q	K	D	A	R	E	L	Q	V	Q	L	D	V	R	N	K	E	I	A	V	Q	K	V	K	A	Y	A	D	L	P	L	R	E	E	V	E	Q	L	E	N	A	A	N	E	L	K	L	K	Q	D	E	I	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3332	.	.	.	.	.	.	.	3340	.	.	.	.	.	.	.	.	.	3350	.	.	.	.	.	.	.	.	.	3360	.	.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380	.	.	.	.	.	.	.	.	.	3390	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	S	W	A	L	G	N	S	E	T	E	K	A	F	R	A	I	S	S	K	V	P	V	D	R	V	T	Q	R	T	L	P	E	Q	V	V	E	F	E	K	F	L	Q	Q	T	G	G	R	Q	G	G	W	D	A	L	D	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	T	A	L	E	K	S	I	A	T	Y	K	E	E	Y	A	T	L	I	R	E	T	E	Q	I	K	T	E	S	S	K	V	K	N	K	V	D	R	S	I	A	L	L	D	N	L	N	S	E	R	G	R	W	E	Q	Q	S	E	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3521	.	.	.	.	.	.	.	.	3530	.	.	.	.	.	.	.	.	.	3540	.	.	.	.	.	.	.	.	.	3550	.	.	.	.	.	.	.	.	.	3560	.	.	.	.	.	.	.	.	.	3570	.	.	.	.	.	.	.	.	.	3580
		174	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	V	K	V	R	N	K	H	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	T	Q	M	S	T	V	V	G	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3581	.	.	.	.	.	.	.	.	3590	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D