Job Description A0AUP1 Confidence 5.54% Date Wed Jul 10 14:15:27 BST 2013 Rank 89 Aligned Residues 116 % Identity 11% Template c3tnfB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:lida; PDBTitle: lida from legionella in complex with active rab8a Resolution 2.50 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	I	H	N	N	V	K	K	L	Q	N	Q	L	K	D	V	K	P	T	P	D	V	V	E	K	L	R	E	M	M	E	E	I	E	N	A	I	N	T	F	K	E	E	Q	R	L	I	Y	E	E	L	I	Q	E	E	K	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	Y	E	Q	A	I	K	R	A	Q	E	N	I	K	K	G	E	E	L	E	K	K	L	D	K	L	E	R	Q	G	K	D	L	E	D	K	Y	K	T	Y	E	E	N	L	E	G	F	E	K	L	L	T	D	S	E	E	L	S
Template Known Secondary structure														T	T	T	T	T	T	T						T	T																						T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	E	L	S	A	V	S	R	R	I	E	S	W	A	L	G	N	S	E	T	E	K	A	F	R	A	I	S	S	K	V	P	V	D	R	V	T	Q	R	T	L	P	E	Q	V	V	E	F	E	K	F	L	Q	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	E	I	N	E	K	M	E	A	F	S	K	D	S	E	K	L	T	Q	L	M	E	K	H	K	G	D	E	K	T	V	Q	S	L	Q	R	E	H	H	D	I	K	A	K	L	A	N	L	Q	V	L	H	D	A	H
Template Known Secondary structure																								T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D