Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUP1
Confidence7.93%DateWed Jul 10 14:15:27 BST 2013
Rank64Aligned Residues8
% Identity50%Templatec3mstA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative nitrate transport protein; PDBTitle: crystal structure of a putative nitrate transport protein (tvn0104)2 from thermoplasma volcanium at 1.35 a resolution
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   434.....440.
Predicted Secondary structure 



Query SS confidence 







Query Sequence  AIPTWRQG
Query Conservation       
  
Alig confidence 







Template Conservation 







Template Sequence  RIYTLRKG
Template Known Secondary structure  SSTT
Template Predicted Secondary structure 

Template SS confidence 







   72.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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