Job Description A0AUP1 Confidence 31.07% Date Wed Jul 10 14:15:27 BST 2013 Rank 26 Aligned Residues 107 % Identity 11% Template c3ghgI_ PDB info PDB header:blood clotting Chain: I: PDB Molecule:fibrinogen gamma chain; PDBTitle: crystal structure of human fibrinogen Resolution 2.90 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		L	Q	N	Q	L	K	D	V	K	P	T	P	D	V	V	E	K	L	R	E	M	M	E	E	I	E	N	A	I	N	T	F	K	E	E	Q	R	L	I	Y	E	E	L	I	Q	E	.	.	.	.	E	K	T	T	N	N	E	L	S	A
Query Conservation																																																.	.	.	.
Alig confidence																																																.	.	.	.
Template Conservation
Template Sequence		T	C	G	I	A	D	F	L	S	T	Y	Q	T	K	V	D	K	D	L	Q	S	L	E	D	I	L	H	Q	V	E	N	K	T	S	E	V	K	Q	L	I	K	A	I	Q	L	T	Y	N	P	D	E	S	S	K	P	N	M	I	D	A
Template Known Secondary structure																		T	T																											T	T	T	S	T	T	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	R	R	I	E	S	W	A	L	G	N	S	E	T	E	K	A	F	R	A	I	S	S	K	V	P	V	D	R	V	T	Q	R	T	L	P	E	Q	V	V	E	F	E	K	F	L	Q	Q	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	L	K	S	R	K	M	L	E	E	I	M	K	Y	E	A	S	I	L	T	H	D	S	S	I	R	Y	L	Q	E	I	Y	N	S	N	N	Q	K	I	V	N	L	K	E	K	V	A	Q	L	E
Template Known Secondary structure																																									T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D