Job Description A0AUP1 Confidence 6.97% Date Wed Jul 10 14:15:27 BST 2013 Rank 71 Aligned Residues 89 % Identity 15% Template c2pmsD_ PDB info PDB header:metal transport, hydrolase Chain: D: PDB Molecule:pneumococcal surface protein a (pspa); PDBTitle: crystal structure of the complex of human lactoferrin n-lobe and2 lactoferrin-binding domain of pneumococcal surface protein a Resolution 2.91 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		K	H	S	H	F	Y	N	Q	R	G	D	F	R	T	E	Y	N	M	L	E	E	L	E	N	K	L	I	N	S	R	K	T	E	R	.	.	.	.	A	K	I	Q	Q	Q	L	A	K	I	H	N	N	V	K	K	L	Q	N	Q	L	K
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.
Template Conservation
Template Sequence		K	I	A	E	L	E	N	Q	V	H	R	L	E	Q	E	L	K	E	I	D	E	A	P	L	Q	S	K	L	D	A	K	K	A	K	L	S	K	L	E	E	L	S	D	K	I	D	E	L	D	A	E	I	A	K	L	E	D	Q	L	K
Template Known Secondary structure																				T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	P	T	P	D	V	V	E	K	L	R	E	M	M	E	E	I	E	N	A	I	N	T	F	K	E	E	Q	R	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	E	E	E	D	Y	F	K	E	G	L	E	K	T	I	A	A	K	K	A	E	L	E	K	T	E	A	D	L	K	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D