Job Description A0AUP1 Confidence 7.64% Date Wed Jul 10 14:15:27 BST 2013 Rank 66 Aligned Residues 204 % Identity 7% Template c2p03A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:alpha-2-macroglobulin receptor-associated PDBTitle: the structure of receptor-associated protein(rap) Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	D	K	H	S	H	F	Y	N	Q	R	G	D	F	R	T	E	Y	N	M	L	E	E	L	E	N	K	L	I	N	S	R	K	T	E	R	A	K	I	Q	Q	Q	L	A	K	I	H	N	N	V	K	K	L	Q	N	Q	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	D	P	R	L	E	K	L	W	H	K	A	K	T	S	G	K	F	S	G	E	E	L	D	K	L	W	R	E	F	L	H	H	K	E	K	V	H	E	Y	N	V	L	L	E	T	L	S	R	T	E	E	I	H	E	N	V	I	S
Template Known Secondary structure		S		S														S				S																														T	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	P	T	P	D	V	V	E	K	L	R	E	M	M	E	E	I	E	N	A	I	N	T	F	K	E	E	Q	R	L	I	Y	E	E	L	I	Q	E	E	K	T	T	N	N	E	L	S	A	V	S	R	R	I	E	S	W	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	D	L	S	D	I	K	G	S	V	L	H	S	R	H	T	E	L	K	E	K	L	R	S	I	N	Q	G	L	D	R	L	R	R	V	S	H	Q	G	Y	S	T	E	A	E	F	E	E	P	R	V	I	D	L	W	D	L	A	Q
Template Known Secondary structure		S		T	T	T	T			S	S	S	S																											T			S					S	S	T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	E	T	E	K	A	F	R	A	I	S	S	K	V	P	V	D	R	V	T	Q	R	T	L	P	E	Q	V	V	E	F	E	K	F	L	Q	Q	T	G	G	R	Q	G	G	W	D	A	L	D	H	Q	N	F	V	K	V	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	N	L	T	D	K	E	L	E	A	F	R	E	E	L	K	H	F	E	A	K	I	E	K	H	N	H	Y	Q	K	Q	L	E	I	A	H	E	K	L	R	H	A	E	S	V	G	D	G	E	R	V	S	R	S	R	E	K	H	A
Template Known Secondary structure		T	T	T																																									G	G	G	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	K	G	K	P	T	F	M	K	E	V	V	E	H	L	P	G	R	T	L	D	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	G	R	T	K	E	L	G	Y	T	V	K	K	H	L	Q	D	L	S	G	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D