Job Description A0AUP1 Confidence 21.87% Date Wed Jul 10 14:15:27 BST 2013 Rank 29 Aligned Residues 99 % Identity 9% Template c1deqO_ PDB info PDB header:blood clotting Chain: O: PDB Molecule:fibrinogen (beta chain); PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution) Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	H	F	Y	N	Q	R	G	D	F	R	T	E	Y	N	M	L	E	E	L	E	N	K	L	I	N	S	R	K	T	E	R	A	K	I	Q	Q	Q	L	A	K	I	H	N	N	V	K	K	L	Q	N	Q	L	K	D	V	K	P	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	T	L	V	R	Q	E	R	P	I	R	K	S	I	E	D	L	R	N	T	V	D	S	V	S	R	T	S	S	S	T	F	Q	Y	I	T	L	L	K	N	M	W	K	G	R	Q	N	Q	V	Q	D	N	E	N	V	V	N	E	Y
Template Known Secondary structure						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	V	V	E	K	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	M	M	E	E	I	E	N	A	I	N	T	F	K	E	E	Q	R	L	I	Y	E	E	L	I	Q	E	E	K	T	T
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	H	L	E	K	H	Q	L	Y	I	D	E	T	V	K	N	N	I	P	T	K	L	R	V	L	R	S	I	L	E	N	L	R	S	K	I	Q	K	L	E	S	D	V	S	T	Q	M	E	Y	C
Template Known Secondary structure										T	T	T	T	T	T	T	T	S	S	S	T	T								T	T																		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D