Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA2A690
DateTue Jul 30 13:13:22 BST 2013
Unique Job ID985d21ce2cb8add7
SequenceMFRNSLKMLL ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.416 Y:38.893 Z:106.610
Model (left) based on template d1n11a_
Top template information
Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
Confidence and coverage
Confidence:100.0% Coverage: 15%
309 residues ( 15% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
758 residues ( 38%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MFRNSLKMLLTGGKSSRKNRSSDGGSEEPPDRRQSSVDSRQSRSGQGGISTESDCAFEPD
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   .........70.........80.........90.........100.........110.........120
Sequence  YAVPPLPVSEGDVEQELGPPPSVDEAANTLMTRLGFLLGEKVTEVQPSDQYSMEVQDENQ
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   .........130.........140.........150.........160.........170.........180
Sequence  TSAITQRISPCSTLTSSTASPPASSPCSTLPPVSTNAAAKDCSYGAVTSPTSTLESRDSG
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   .........190.........200.........210.........220.........230.........240
Sequence  IIATLTNYSENMERTKYVGEGSKELGSGGNLKPWQSQKSSMDSCLYRVDENMAASTYSLN
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   .........250.........260.........270.........280.........290.........300
Sequence  KIPERNLETVLSQSVQSIPLYLMPRPNSVAATSSAHLEDLAYLDEQRHTPLRTSLRMPRQ
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   .........310.........320.........330.........340.........350.........360
Sequence  SLSGARTQQDLRVRFAPYRPPDISLKPLLFEVPSITTESVFVGRDWVFHEIDAQLQSSNA
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   .........370.........380.........390.........400.........410.........420
Sequence  SVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIASDSPHASPKHVDANRELPLTQAP
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   .........430.........440.........450.........460.........470.........480
Sequence  SAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQADNAYTCLVPEFVHNVAALLC
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   .........490.........500.........510.........520.........530.........540
Sequence  RSPQLTAYREQLLREPHLQSMLSLRSCVQDPMASFRRGVLEPLENLHKERKIPDEDFIIL
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   .........550.........560.........570.........580.........590.........600
Sequence  IDGLNEAEFHKPDYGDTIVSFLSKMIGNFPSWLKLIVTVRTSLQEITKLLPFHRIFLDRL
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   .........610.........620.........630.........640.........650.........660
Sequence  EENEAIDQDLQAYILHRIHSSSEIQNNISLNGKMDNTTFGKLSSHLKTLSQGSYLYLKLT
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   .........670.........680.........690.........700.........710.........720
Sequence  FDLIEKGYLVLKSSSYKVVPVSLSEVYLLQCNMKFPTQSSFDRVMPLLNVAVASLHPLTD
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   .........730.........740.........750.........760.........770.........780
Sequence  EHIFQAINAGSIEGTLEWEDFQQRMENLSMFLIKRRDMTRMFVHPSFREWLIWREEGEKT
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   .........790.........800.........810.........820.........830.........840
Sequence  KFLCDPRSGHTLLAFWFSRQEGKLNRQQTIELGHHILKAHIFKGLSKKVGVSSSILQGLW
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   .........850.........860.........870.........880.........890.........900
Sequence  ISYSTEGLSMALASLRNLYTPNIKVSRLLILGGANINYRTEVLNNAPILCVQSHLGYTEM
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   .........910.........920.........930.........940.........950.........960
Sequence  VALLLEFGANVDASSESGLTPLGYAAAAGFLSIVVLLCKKRAKVDHLDKNGQCALVHAAL
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  RGHLEVVKFLIQCDWTMAGQQQGVFKKSHAIQQALIAAASMGYTEIVSYLLDLPEKDEEE
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  VERAQINSFDSLWGETALTAAAGRGKLDVCRLLLEQGAAVAQPNRRGAVPLFSTVRQGHW
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  QIVDLLLTHGADVNMADKQGRTPLMMAASEGHLGTVDFLLAQGASIALMDKEGLTALSWA
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  CLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAAFYGDAEVVQFLVDHGAMIEHVDYSGM
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   .........1210.........1220.........1230.........1240.........1250.........1260
Sequence  RPLDRAVGCRNTSVVVTLLKKGAKIGPATWAMATSKPDIMIILLSKLMEEGDMFYKKGKV
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   .........1270.........1280.........1290.........1300.........1310.........1320
Sequence  KEAAQRYQYALKKFPREGFGEDLKTFRELKVSLLLNLSRCRRKMNDFGMAEEFATKALEL
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   .........1330.........1340.........1350.........1360.........1370.........1380
Sequence  KPKSYEAYYARARAKRSSRQFAAALEDLKEAIKLCPNNREIQRLLMRVEEECRQMQQQQQ
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   .........1390.........1400.........1410.........1420.........1430.........1440
Sequence  QQPPPPPQQPPQELPEEETEPEPQHEDIYSVQDIFEEEYLEQDVENVSIGLQTEARPSQG
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   .........1450.........1460.........1470.........1480.........1490.........1500
Sequence  LPVIQSPPSSPAHRDSAYISSSPLGSHQVFDFRSNSSVGSPTRQGYQSTSPALSPTHQNS
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   .........1510.........1520.........1530.........1540.........1550.........1560
Sequence  HYRPSPPHTSPAHQGASYRFSPPPVGGQSKEYPSPPPSPLRRGPQYRASPPAESMSVYRS
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   .........1570.........1580.........1590.........1600.........1610.........1620
Sequence  QSGSPVRYQQETNVSQLPGRPKSPLSKMAQRPYQMPQLPVAVPQQGLRLQPAKAQIVRSN
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   .........1630.........1640.........1650.........1660.........1670.........1680
Sequence  QPSSAVHSSTVIPTGAYGQVAHSMASKYQSSQGDMGVSQSRLVYQGSIGGIVGDGRPVQH
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   .........1690.........1700.........1710.........1720.........1730.........1740
Sequence  VQASLSAGAICQHGGLTKEDLPQRPSSAYRGGMRYSQTPQIGRSQSASYYPVCHSKLDLE
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   .........1750.........1760.........1770.........1780.........1790.........1800
Sequence  RSSSQLGSPDVSHLIRRPISVNPNEIKPHPPTPRPLLHSQSVGLRFSPSSNSISSTSNLT
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   .........1810.........1820.........1830.........1840.........1850.........1860
Sequence  PTFRPSSSIQQMEIPLKPAYDRSCDELSPVSPTQGGYPSEPTRSRTTPFMGIIDKTARTQ
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   .........1870.........1880.........1890.........1900.........1910.........1920
Sequence  QYPHLHQQNRTWAVSSVDTVLSPTSPGNLPQPESFSPPSSISNIAFYNKTNNAQNGHLLE
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   .........1930.........1940.........1950.........1960.........1970.........1980
Sequence  DDYYSPHGMLANGSRGDLLERVSQASSYPDVKVARTLPVAQAYQDNLYRQLSRDSRQGQT
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   .........1990....
Sequence  SPIKPKRPFVESNV
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Confidence Key
High(9)                    Low (0)
?Disordered ( 45%)
Alpha helix ( 40%)
Beta strand ( 3%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1n11 chain A

3D model

Region: 886 - 1201
Aligned: 309
Modelled: 316
Confidence: 100.0%
Identity: 34%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1n11 chain A

3D model

Region: 886 - 1201
Aligned: 309
Modelled: 316
Confidence: 100.0%
Identity: 34%
PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker

Phyre2

PDB 3kea chain B

3D model

Region: 889 - 1167
Aligned: 251
Modelled: 279
Confidence: 100.0%
Identity: 16%
PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function

Phyre2

PDB 2aja chain A domain 1

3D model

Region: 910 - 1155
Aligned: 231
Modelled: 246
Confidence: 100.0%
Identity: 19%
Fold: alpha-alpha superhelix
Superfamily: Pseudo ankyrin repeat-like
Family: Pseudo ankyrin repeat

Phyre2

PDB 4bep chain B

3D model

Region: 880 - 1210
Aligned: 321
Modelled: 331
Confidence: 100.0%
Identity: 14%
PDB header:transferase
Chain: B: PDB Molecule:phosphocholine transferase ankx;
PDBTitle: crystal structure of the legionella pneumophila fic domain-2 containing effector ankx protein (apo-form)

Phyre2

PDB 1s70 chain B

3D model

Region: 889 - 1196
Aligned: 280
Modelled: 308
Confidence: 100.0%
Identity: 20%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3utm chain A

3D model

Region: 906 - 1221
Aligned: 295
Modelled: 316
Confidence: 100.0%
Identity: 25%
PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex

Phyre2

PDB 3ljn chain A

3D model

Region: 914 - 1225
Aligned: 283
Modelled: 292
Confidence: 100.0%
Identity: 18%
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major

Phyre2

PDB 2aja chain A

3D model

Region: 948 - 1188
Aligned: 224
Modelled: 241
Confidence: 100.0%
Identity: 17%
PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.

Phyre2

PDB 4g8k chain A

3D model

Region: 883 - 1191
Aligned: 293
Modelled: 309
Confidence: 100.0%
Identity: 29%
PDB header:hydrolase
Chain: A: PDB Molecule:2-5a-dependent ribonuclease;
PDBTitle: intact sensor domain of human rnase l in the inactive signaling state

Phyre2

PDB 2xai chain D

3D model

Region: 919 - 1188
Aligned: 249
Modelled: 259
Confidence: 100.0%
Identity: 19%
PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc

Phyre2

PDB 2fo1 chain E

3D model

Region: 878 - 1154
Aligned: 262
Modelled: 273
Confidence: 100.0%
Identity: 22%
PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna

Phyre2

PDB 1sw6 chain A

3D model

Region: 994 - 1208
Aligned: 204
Modelled: 215
Confidence: 100.0%
Identity: 19%
PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment

Phyre2

PDB 1sw6 chain A

3D model

Region: 994 - 1208
Aligned: 204
Modelled: 215
Confidence: 100.0%
Identity: 19%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 2fo1 chain E domain 1

3D model

Region: 886 - 1154
Aligned: 254
Modelled: 265
Confidence: 100.0%
Identity: 22%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1wdy chain A

3D model

Region: 883 - 1163
Aligned: 274
Modelled: 281
Confidence: 100.0%
Identity: 29%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3jxi chain A

3D model

Region: 947 - 1188
Aligned: 225
Modelled: 225
Confidence: 100.0%
Identity: 24%
PDB header:membrane protein
Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain

Phyre2

PDB 3b7b chain B

3D model

Region: 920 - 1158
Aligned: 223
Modelled: 239
Confidence: 100.0%
Identity: 28%
PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)

Phyre2

PDB 1uoh chain A

3D model

Region: 917 - 1154
Aligned: 220
Modelled: 238
Confidence: 100.0%
Identity: 30%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3eu9 chain B

3D model

Region: 947 - 1187
Aligned: 225
Modelled: 241
Confidence: 100.0%
Identity: 25%
PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14

Phyre2

PDB 3iyt chain G

3D model

Region: 335 - 892
Aligned: 430
Modelled: 430
Confidence: 99.7%
Identity: 17%
PDB header:apoptosis
Chain: G: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: structure of an apoptosome-procaspase-9 card complex

Phyre2

PDB 1ixs chain B domain 2

3D model

Region: 323 - 387
Aligned: 57
Modelled: 57
Confidence: 96.1%
Identity: 19%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Extended AAA-ATPase domain

Phyre2
1

d1n11a_
2

c1n11A_
3

c3keaB_
4

d2ajaa1
5

c4bepB_
6

d1s70b_
7

c3utmA_
8

c3ljnA_
9

c2ajaA_
10

c4g8kA_
11

c2xaiD_
12

c2fo1E_
13

c1sw6A_
14

d1sw6a_
15

d2fo1e1
16

d1wdya_
17

c3jxiA_
18

c3b7bB_
19

d1uoha_
20

c3eu9B_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1n11a_



100.0 34 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
2c1n11A_



100.0 34 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker
3c3keaB_



100.0 16 PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function
4d2ajaa1



100.0 19 Fold:alpha-alpha superhelix
Superfamily:Pseudo ankyrin repeat-like
Family:Pseudo ankyrin repeat
5c4bepB_



100.0 14 PDB header:transferase
Chain: B: PDB Molecule:phosphocholine transferase ankx;
PDBTitle: crystal structure of the legionella pneumophila fic domain-2 containing effector ankx protein (apo-form)
6d1s70b_



100.0 20 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
7c3utmA_



100.0 25 PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex
8c3ljnA_



100.0 18 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major
9c2ajaA_



100.0 17 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.
10c4g8kA_



100.0 29 PDB header:hydrolase
Chain: A: PDB Molecule:2-5a-dependent ribonuclease;
PDBTitle: intact sensor domain of human rnase l in the inactive signaling state
11c2xaiD_



100.0 19 PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc
12c2fo1E_



100.0 22 PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna
13c1sw6A_



100.0 19 PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment
14d1sw6a_



100.0 19 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
15d2fo1e1



100.0 22 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
16d1wdya_



100.0 29 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
17c3jxiA_



100.0 24 PDB header:membrane protein
Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain
18c3b7bB_



100.0 28 PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)
19d1uoha_



100.0 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
20c3eu9B_



100.0 25 PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14
21c2f8xK_



not modelled 100.0 24 PDB header:transcription/dna
Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence
22c2f37B_



not modelled 100.0 23 PDB header:membrane protein
Chain: B: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2
23c4hbdA_



not modelled 100.0 29 PDB header:protein binding
Chain: A: PDB Molecule:kn motif and ankyrin repeat domain-containing protein 2;
PDBTitle: crystal structure of kank2 ankyrin repeats
24d1k1aa_



not modelled 100.0 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
25c2vgeA_



not modelled 100.0 23 PDB header:transcription
Chain: A: PDB Molecule:rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp
26c1ycsB_



not modelled 100.0 22 PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex
27c3d9hA_



not modelled 100.0 18 PDB header:structural protein, protein binding
Chain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens
PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein
28d1ixva_



not modelled 100.0 27 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
29c3t8kB_



not modelled 99.9 17 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b
30d1iknd_



not modelled 99.9 22 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
31c2kbxA_



not modelled 99.9 28 PDB header:cell adhesion
Chain: A: PDB Molecule:integrin-linked protein kinase;
PDBTitle: solution structure of ilk-pinch complex
32d1ot8a_



not modelled 99.9 31 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
33c3ui2A_



not modelled 99.9 23 PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic;
PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43
34c2nyjA_



not modelled 99.9 22 PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of trpv1
35c3t9kA_



not modelled 99.9 22 PDB header:protein transport
Chain: A: PDB Molecule:arf-gap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of acap1 c-portion mutant s554d fused with integrin2 beta1 peptide
36c3ehrB_



not modelled 99.9 24 PDB header:signaling protein
Chain: B: PDB Molecule:osteoclast-stimulating factor 1;
PDBTitle: crystal structure of human osteoclast stimulating factor
37c1oy3D_



not modelled 99.9 25 PDB header:dna binding protein
Chain: D: PDB Molecule:transcription factor inhibitor i-kappa-b-beta;
PDBTitle: crystal structure of an ikbbeta/nf-kb p65 homodimer complex
38d1oy3d_



not modelled 99.9 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
39c3deoA_



not modelled 99.9 26 PDB header:protein transport, membrane protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein;
PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43
40c3jueA_



not modelled 99.9 26 PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
41c2rfaA_



not modelled 99.9 23 PDB header:membrane protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
42c3v31A_



not modelled 99.9 25 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family a protein 2;
PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human ankra2
43c3hraA_



not modelled 99.9 25 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: crystal structure of ef0377 an ankyrin repeat protein
44c2b0oF_



not modelled 99.9 21 PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain
45c3lvrE_



not modelled 99.9 22 PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
46d1dcqa1



not modelled 99.9 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
47c4b93B_



not modelled 99.9 29 PDB header:exocytosis
Chain: B: PDB Molecule:ankyrin repeat domain-containing protein 27;
PDBTitle: complex of vamp7 cytoplasmic domain with 2nd ankyrin repeat2 domain of varp
48c1dcqA_



not modelled 99.9 24 PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.
49c4gmrA_



not modelled 99.9 42 PDB header:de novo protein
Chain: A: PDB Molecule:or266 de novo protein;
PDBTitle: crystal structure of engineered protein. northeast structural genomics2 consortium target or266.
50c1ympB_



not modelled 99.9 25 PDB header:transcription
Chain: B: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
51d1ycsb1



not modelled 99.9 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
52c1ympA_



not modelled 99.9 25 PDB header:transcription
Chain: A: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
53c2rfmB_



not modelled 99.9 24 PDB header:protein binding
Chain: B: PDB Molecule:putative ankyrin repeat protein tv1425;
PDBTitle: structure of a thermophilic ankyrin repeat protein
54c3twtD_



not modelled 99.9 32 PDB header:signaling protein/peptide
Chain: D: PDB Molecule:tankyrase-2;
PDBTitle: crystal structure of arc4 from human tankyrase 2 in complex with2 peptide from human mcl1 (chimeric peptide)
55d2a5ea_



not modelled 99.9 26 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
56c1mj0A_



not modelled 99.9 37 PDB header:de novo protein
Chain: A: PDB Molecule:sank e3_5 protein;
PDBTitle: sank e3_5: an artificial ankyrin repeat protein
57c3v30A_



not modelled 99.8 30 PDB header:protein binding
Chain: A: PDB Molecule:dna-binding protein rfxank;
PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
58d1blxb_



not modelled 99.8 31 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
59d1awcb_



not modelled 99.8 32 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
60d1ihba_



not modelled 99.8 35 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
61d1myoa_



not modelled 99.8 31 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
62c3c5rB_



not modelled 99.8 29 PDB header:protein binding
Chain: B: PDB Molecule:brca1-associated ring domain protein 1;
PDBTitle: crystal structure of the bard1 ankyrin repeat domain and its2 functional consequences
63c2v5qC_



not modelled 99.8 40 PDB header:transferase
Chain: C: PDB Molecule:design ankyrin repeat protein;
PDBTitle: crystal structure of wild-type plk-1 kinase domain in2 complex with a selective darpin
64c2jabC_



not modelled 99.8 34 PDB header:de novo protein
Chain: C: PDB Molecule:h10-2-g3;
PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2
65d1bd8a_



not modelled 99.8 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
66d1bi7b_



not modelled 99.8 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
67c2l6bA_



not modelled 99.8 37 PDB header:de novo protein
Chain: A: PDB Molecule:nr1c;
PDBTitle: nrc consensus ankyrin repeat protein solution structure
68c2zgdA_



not modelled 99.8 35 PDB header:de novo protein
Chain: A: PDB Molecule:3 repeat synthetic ankyrin;
PDBTitle: asn-hydroxylation stabilises the ankyrin repeat domain fold
69c2xenA_



not modelled 99.7 38 PDB header:de novo protein
Chain: A: PDB Molecule:ni1c mut4;
PDBTitle: structural determinants for improved thermal stability of2 designed ankyrin repeat proteins with a redesigned c-3 capping module.
70c3iytG_



99.7 17 PDB header:apoptosis
Chain: G: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: structure of an apoptosome-procaspase-9 card complex
71c1n0qB_



not modelled 99.7 50 PDB header:structural protein
Chain: B: PDB Molecule:3 ankyrin repeats;
PDBTitle: 3ank: a designed ankyrin repeat protein with three identical consensus2 repeats
72c1n0rA_



not modelled 99.6 51 PDB header:structural protein
Chain: A: PDB Molecule:4 ankyrin repeats;
PDBTitle: 4ank: a designed ankyrin repeat protein with four identical2 consensus repeats
73c2qenA_



not modelled 99.4 14 PDB header:unknown function
Chain: A: PDB Molecule:walker-type atpase;
PDBTitle: the walker-type atpase paby2304 of pyrococcus abyssi
74c4kxfF_



not modelled 99.3 17 PDB header:immune system
Chain: F: PDB Molecule:nlr family card domain-containing protein 4;
PDBTitle: crystal structure of nlrc4 reveals its autoinhibition mechanism
75c2fnaA_



not modelled 99.2 13 PDB header:atp-binding protein
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus2 solfataricus p2 at 2.00 a resolution
76c2v1uA_



not modelled 99.1 16 PDB header:replication
Chain: A: PDB Molecule:cell division control protein 6 homolog;
PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
77c4kxfP_



not modelled 99.0 18 PDB header:immune system
Chain: P: PDB Molecule:nlr family card domain-containing protein 4;
PDBTitle: crystal structure of nlrc4 reveals its autoinhibition mechanism
78d2fnaa2



not modelled 99.0 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
79c1w5sB_



not modelled 98.8 9 PDB header:replication
Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2;
PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form)
80c2qbyB_



not modelled 98.7 14 PDB header:replication/dna
Chain: B: PDB Molecule:cell division control protein 6 homolog 3;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
81c3iz8A_



not modelled 98.6 14 PDB header:apoptosis
Chain: A: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
82c3iz8F_



not modelled 98.6 14 PDB header:apoptosis
Chain: F: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
83c3iz8D_



not modelled 98.6 14 PDB header:apoptosis
Chain: D: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
84c1vt4M_



not modelled 98.6 14 PDB header:apoptosis
Chain: M: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
85c1vt4I_



not modelled 98.6 14 PDB header:apoptosis
Chain: I: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
86c3iz8B_



not modelled 98.6 14 PDB header:apoptosis
Chain: B: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
87c3iz8E_



not modelled 98.6 14 PDB header:apoptosis
Chain: E: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
88c1vt4P_



not modelled 98.6 14 PDB header:apoptosis
Chain: P: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
89c1vt4N_



not modelled 98.6 14 PDB header:apoptosis
Chain: N: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
90c1vt4O_



not modelled 98.6 14 PDB header:apoptosis
Chain: O: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
91c1vt4K_



not modelled 98.6 14 PDB header:apoptosis
Chain: K: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
92c1vt4J_



not modelled 98.6 14 PDB header:apoptosis
Chain: J: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
93c3iz8H_



not modelled 98.6 14 PDB header:apoptosis
Chain: H: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
94c3iz8G_



not modelled 98.6 14 PDB header:apoptosis
Chain: G: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
95c1vt4L_



not modelled 98.6 14 PDB header:apoptosis
Chain: L: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
96c3iz8C_



not modelled 98.6 14 PDB header:apoptosis
Chain: C: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
97c2qbyA_



not modelled 98.5 17 PDB header:replication/dna
Chain: A: PDB Molecule:cell division control protein 6 homolog 1;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
98c1z6tC_



not modelled 98.5 15 PDB header:apoptosis
Chain: C: PDB Molecule:apoptotic protease activating factor 1;
PDBTitle: structure of the apoptotic protease-activating factor 12 bound to adp
99c1fnnB_



not modelled 98.3 15 PDB header:cell cycle
Chain: B: PDB Molecule:cell division control protein 6;
PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
100c3te6A_



not modelled 98.2 21 PDB header:gene regulation
Chain: A: PDB Molecule:regulatory protein sir3;
PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
101d1w5sa2



not modelled 97.8 11 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
102c2zamA_



not modelled 97.4 22 PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b;
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
103d1a5ta2



not modelled 97.3 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
104d1fnna2



not modelled 97.3 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
105c3b9pA_



not modelled 97.3 21 PDB header:hydrolase
Chain: A: PDB Molecule:cg5977-pa, isoform a;
PDBTitle: spastin
106d1sxjb2



not modelled 97.2 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
107c4b4tJ_



not modelled 97.1 24 PDB header:hydrolase
Chain: J: PDB Molecule:26s protease regulatory subunit 8 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
108d1szpa2



not modelled 97.0 12 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
109d1jbka_



not modelled 97.0 30 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
110c2chvE_



not modelled 96.9 17 PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
111c2chgB_



not modelled 96.9 16 PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
112c1xxhB_



not modelled 96.9 16 PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
113c3pvsA_



not modelled 96.9 15 PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
114c4b4tK_



not modelled 96.8 23 PDB header:hydrolase
Chain: K: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
115c1jr3E_



not modelled 96.8 16 PDB header:transferase
Chain: E: PDB Molecule:dna polymerase iii, delta' subunit;
PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii
116c1sxjE_



not modelled 96.8 15 PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
117d1r6bx2



not modelled 96.8 27 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
118c2p65A_



not modelled 96.8 26 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pf08_0063;
PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
119c4b4tL_



not modelled 96.7 22 PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
120d1n0wa_



not modelled 96.7 12 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)

Binding site prediction 

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