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Job DescriptionA1A5B6
Confidence100.00%DateWed Jul 10 14:22:24 BST 2013
Rank9Aligned Residues225
% Identity18%Templatec3dzxA_
PDB info PDB header:hydrolase activatorChain: A: PDB Molecule:tbc1 domain family member 22b; PDBTitle: crystal structure of the rabgap domain of human tbc1d22b
Resolution2.30 Å
Model Dimensions (Å)X:57.900 Y:64.918 Z:41.235

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280.........290.........300.........310.....
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Query Sequence  AEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRK
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Template Sequence  EKFRQLLSSQN. . TDLDELRKCSW. PGVPREVRPITWRLLSGYLPANT. . . . . . . . LQRK
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T.T


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   187..190....... ..200........ .210.........220.........230. ....
 
   316...320.........330.........340.........350.........360.........370.....
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Query Sequence  SREYEQLKSEWAQRVNPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTY
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Template Sequence  REEYFGFIEQYYPLFQQP. . . . . . . LVQEIFERILFIWAIRH. PASGINDLVTPFFVVFL
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SGGG
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   242.......250......... 260.........270...... ...280.........290...
 
   376...380.........390.........400.........410.........420.........430.....
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Query Sequence  AVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLK
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Template Sequence  SEYVEEDVENFDVTNLSQDMLRSI. . EADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALE
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GGG

GGGS
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   324.....330.........340....... ..350.........360.........370.........380.
 
   436...440.........450.........460.........470.........480.........490.....
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Query Sequence  LLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEH
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Template Sequence  ELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPSHFHLYV
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TT

TTTTGGGS



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   382.......390.........400.........410.........420.........430.........440.
 
   496...500.
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Query Sequence  EVELVG
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Template Sequence  CAAFLI
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   445....450
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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