 |
Job Description | A1A5B6 | Confidence | 24.19% | Date | Wed Jul 10 14:22:24 BST 2013 |
Rank | 40 | Aligned Residues | 68 |
% Identity | 25% | Template | d1pqsa_ |
SCOP info | beta-Grasp (ubiquitin-like)
| CAD & PB1 domains
| PB1 domain
|
Resolution | UNK |
|
 |
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | R | S | F | A | V | D | P | Q | I | T | S | L | D | V | L | Q | H | I | L | I | R | A | F | D | L | N | G | K | K | N | . |
. |
. |
. |
F | G | I | S | Y | L | A | R | D | R | L | G | Q | E | T | F | L | S | L | L | S | D | W | D |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|   |   |   | . |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
| . | . | . | . |   |
|   |
|   |   |
|   |
|
Template Sequence |   |
E | I | F | T | L | L | V | E | K | V | . |
W | N | F | D | D | L | I | M | A | I | N | S | K | I | S | N | T | H | N | N | N | I | S | P | I | T | K | I | K | Y | Q | D | E | D | G | D | . |
. |
. |
. |
F | V | V | L | G | S | D | E | D |
Template Known Secondary structure |   |
|  |  |  |  |  |
| T | T |
| . |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | S | S |
| S |
| S | T | T |
|
|  |  |  |  | T | T | T |  | . | . | . | . |  |  |  |
|
| S | T | T |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
779 | 780 | . | . | . | . | . | . | . | . | |
. | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | |
|
|
|
. | . | . | . | . | 830 | . | . | . |
  |
  |   |
160 | . | . | . | . | . | |
|
|
. | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | T | A | F | A | . |
. |
. |
T | A | S | K | P | Y | L | Q | L | R | V |
Query Conservation |   |
|
|   |
|   |   | . | . | . |   |   |
|   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |
|   |
|   |   |
Template Sequence |   |
W | N | V | A | K | E | M | L | A | E | N | N | E | K | F | L | N | I | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
834 | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|