 |
Job Description | A1A5B6 | Confidence | 38.35% | Date | Wed Jul 10 14:22:24 BST 2013 |
Rank | 27 | Aligned Residues | 49 |
% Identity | 24% | Template | c2wo3B_ |
PDB info |
PDB header:transferase/signaling protein | Chain: B: PDB Molecule:ephrin-a2; |
PDBTitle: crystal structure of the epha4-ephrina2 complex
|
Resolution | 2.35 Å |
|
 |
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | F | D | L | N | G | K | K | N | F | G | I | S | Y | L | A | R | D | . |
. |
. |
. |
. |
. |
. |
. |
R | L | G | Q | E | T | F | L | S | L | L | S | D | W | D | L | S | T | A | F | A | T | A | S | K | P | Y | L | Q | L | R | V | D |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|
|
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|   |
|   |
Template Sequence |   |
R | P | A | A | P | G | G | P | L | K | F | S | E | K | F | Q | L | F | T | P | F | S | L | G | F | E | F | R | P | G | H | E | Y | Y | Y | I | S | A | T | P | P | N | . |
. |
. |
. |
. |
. |
A | V | D | R | P | C | L | R | L | K | V | Y |
Template Known Secondary structure |   |
| T | T |
| T | T | S | S |
|  |  |  |  |  |
|
| S | S |
| S | S | T | T | S |
|
|
|
| T | T |
|  |  |  |  |  |  |  |
| T | T |
| . | . | . | . | . | . | S |
|
| T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
178 | . | 180 |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
I | R | P |
Query Conservation |   |
  |   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |
|
Template Sequence |   |
V | R | P |
Template Known Secondary structure |   |
 |
|
|
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
170 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|