Return to main results Retrieve Phyre Job Id

Job DescriptionA1A5B6
Confidence38.35%DateWed Jul 10 14:22:24 BST 2013
Rank27Aligned Residues49
% Identity24%Templatec2wo3B_
PDB info PDB header:transferase/signaling proteinChain: B: PDB Molecule:ephrin-a2; PDBTitle: crystal structure of the epha4-ephrina2 complex
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.... .....150.........160.........170.......
Predicted Secondary structure 








........












Query SS confidence 


















. . . . . . . .
































Query Sequence  RAFDLNGKKNFGISYLARD. . . . . . . . RLGQETFLSLLSDWDLSTAFATASKPYLQLRVD
Query Conservation    
       
   
    ........           





 
    
 
 
 
   
Alig confidence 


















........














......











Template Conservation   
       


 


 


 
 
 

 

  

 



   ......     



 
 
Template Sequence  RPAAPGGPLKFSEKFQLFTPFSLGFEFRPGHEYYYISATPPN. . . . . . AVDRPCLRLKVY
Template Known Secondary structure 
TT
TTSS


SS
SSTTS



TT

TT
......S

TT

Template Predicted Secondary structure 





















......




Template SS confidence 



























































   116...120.........130.........140.........150....... ..160.........
 
   178.180
Predicted Secondary structure 
Query SS confidence 


Query Sequence  IRP
Query Conservation    
Alig confidence 


Template Conservation 
 
Template Sequence  VRP
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 


   170..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D