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Job DescriptionA1A5B6
Confidence100.00%DateWed Jul 10 14:22:24 BST 2013
Rank4Aligned Residues259
% Identity25%Templatec2qq8A_
PDB info PDB header:hydrolase activatorChain: A: PDB Molecule:tbc1 domain family member 14; PDBTitle: crystal structure of the putative rabgap domain of human2 tbc1 domain family member 14
Resolution2.00 Å
Model Dimensions (Å)X:61.014 Y:65.991 Z:46.274

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260.........270.........280.........290.........300.........310.......
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Query Sequence  FHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRKSR
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Template Sequence  WNNEILPNWE. WCSRKVRDLW. WQGIPPSVRGKVWSLAIGNE. . . . . . . . . . . . LNITHE
Template Known Secondary structure  TTGGG

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   362.......370. ........380. ........390.........400. ......
 
   318.320.........330.........340.........350.........360.........370.......
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Query Sequence  EYEQLKSEWAQRVNPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAV
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Template Sequence  LFDICLARAKERWEASL. . . . . ELIKLDISRTFPNLCIFQ. . QGGPYHDMLHSILGAYTC
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   410.........420...... ...430.........440.... .....450.........460..
 
   378.380.........390.........400.........410..... ....420.........430.....
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Query Sequence  THPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKR. . LAANFHPDGRAMATKFAHLK
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Template Sequence  YRPDVGYVQGMSFIAAVLILNLDTA. DAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFE
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TTT


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   485....490.........500......... 510.........520.........530.........540...
 
   436...440.........450.........460.........470.........480.........490.....
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Query Sequence  LLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEH
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Template Sequence  VFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCR. . . . . . . . .
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TT

GGGTTTTTTTS
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   544.....550.........560.........570.........580.........590....
 
   496...500.........510.........520.........530.........540.........550.....
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Query Sequence  EVELVGPPSQVADTGFGSHRGRPVRQRHMLRPAGGGGGAFEDAVVHLAASSQGPSGGGRL
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   556...560.........570.........580.........590.........600.........610.....
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Query Sequence  LRQASLDGLQQLRDNMGLRKDHLVQLSHPATLISSKSLSEPLLNSPDPLLSTSSRPDSPS
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   616...620.........630.........640.........650.........660.........670.....
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Query Sequence  SSSPPSTQEASPSGDIAVGSPLMQEVGSPRDPGKPVPPPPPMGLPPPQEFGRGNPFMLFL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGEEFLFRT
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   595....600...
 
   676...680.........690.........700.........710.........720
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Query Sequence  CLAILLEHRDHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRAKAL
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Template Sequence  ALGILKLFEDILTK. . MDFIHMAQFLTRLPEDLPAEELFASIATI
Template Known Secondary structure  TT..

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   604.....610....... ..620.........630.........640......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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