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Job DescriptionA1A5B6
Confidence97.60%DateWed Jul 10 14:22:24 BST 2013
Rank13Aligned Residues87
% Identity15%Templatec2ktrA_
PDB info PDB header:signaling protein, transport proteinChain: A: PDB Molecule:sequestosome-1; PDBTitle: nmr structure of p62 pb1 dimer determined based on pcs
ResolutionUNK
Model Dimensions (Å)X:35.560 Y:41.986 Z:31.271

  Insertion relative to template
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  Catalytic residue from the CSA
 
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   8990....... ..100.........110 .........120.........130.......
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Query Sequence  VVRVRVKKC. ESFLSPEFRSFAV. . . . . . . . . . DPQITSLDVLQHILIRAFDLNGKKNFG
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Template Sequence  SLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPSERLLSRVAVLFPALRPGGFQ
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   3......10.........20.........30.........40.........50.........60..
 
   138.140.........150.........160.........170.........
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Query Sequence  ISYLARDRLGQETFLSLLSDWDLSTAFATASKPYLQLRVDIR
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Template Sequence  AHYRAERGD. . . . LVAFSSDEELTMAMSYVKDDIFRIYIKEK
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   63......70. ........80.........90.........100
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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