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Job DescriptionA1A5B6
Confidence100.00%DateWed Jul 10 14:22:24 BST 2013
Rank7Aligned Residues159
% Identity23%Templated1fkma1
SCOP infoLeft-handed superhelix Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p
Resolution1.90
Model Dimensions (Å)X:38.450 Y:53.328 Z:35.579

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280.........290.........300.........310.....
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Query Sequence  AEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRK
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Template Sequence  SKFDNILKDKTII. NQQDLRQISWN. GIPKIHRPVVWKLLIGYLPVNTKRQEGF. . LQRK
Template Known Secondary structure  SS
SB
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TT.


GGGTT
S
SBGGG..
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   256...260........ .270......... 280.........290.........300....... ..310.
 
   316...320.........330.........340.........350.........360.........370.....
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Query Sequence  SREYEQLKSEWAQRVNPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTY
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Template Sequence  RKEYRDSLKHTFSDQHSRDIPTWH. QIEIDIPRTNPHIPLYQ. . . FKSVQNSLQRILYLW
Template Known Secondary structure  TSSSS
ST.GGGSSTTSGGGG...S
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   312.......320.........330..... ....340.........350.. .......360.......
 
   376...380.........390.........400. ......
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Query Sequence  AVTHPQVSYCQGMSDLASPILAVMDH. . . . . . . . . . . . . . . . . . . . . . . . . . . . EGHAFV
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Template Sequence  AIRHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYXVDEQITDLEADTFW
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TTT
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TTGGGS
GGGGGGTTTS
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   368.370.........380.........390.........400.........410.........420.......
 
   408.410.........420..
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Query Sequence  CFCGIMKRLAANFHP
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Template Sequence  CLTKLLEQITDNYIH
Template Known Secondary structure  GGGGGGS

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   428.430.........440..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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