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Job Description | A1A5B6 | Confidence | 26.28% | Date | Wed Jul 10 14:22:24 BST 2013 |
Rank | 34 | Aligned Residues | 95 |
% Identity | 7% | Template | c2is9A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:defective in cullin neddylation protein 1; |
PDBTitle: structure of yeast dcn-1
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Resolution | 1.92 Å |
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388 | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | |
. | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | S | D | L | A | S | P | I | L | A | V | M | D | H | E | G | H | A | F | . |
V | C | F | C | G | I | M | K | R | L | A | A | N | F | H | P | D | G | R | A | M | A | T | K | F | A | H | L | K | L | L | L | R | H | A | D | P | D | F | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | D | L | A | T | L | C | L | A | H | L | L | G | Y | K | K | L | E | E | P | L | K | R | E | D | F | L | S | T | W | F | M | Q | G | C | S | T | I | S | D | M | Q | E | C | I | K | T | L | D | V | K | L | H | E | . |
D | L | Q | Y | F |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
. | 160 | . | . | . |
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447 | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | Y | L | Q | E | A | G | A | D | D | L | F | F | C | Y | R | W | L | L | L | E | L | K | R | E | F | A | F | D | D | A | L | R | M | L | E | V | T | W | S | S | L | P | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | Q | I | . |
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Y | N | Y | A | F | N | L | I | L | D | P | N | R | K | D | I | D | T | D | E | G | I | Q | Y | W | K | L | F | F | Q | P | E | Y | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
164 | . | . | |
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. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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