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Job DescriptionA1A5B6
Confidence11.06%DateWed Jul 10 14:22:24 BST 2013
Rank77Aligned Residues183
% Identity14%Templatec3se6A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 2; PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2
Resolution3.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   255....260.........270.........280.........290.........300.........310....
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Query Sequence  DAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKR
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Template Sequence  AELFSQWMESSGKLNIPTDVLKIVYSVGAQTT. . . AGWNYLLEQYELSMSSAEQNKILYA
Template Known Secondary structure  TTT
S


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   771........780.........790.........800.. .......810.........820.......
 
   315....320.........330.........340..... ....350.........360.........370...
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Query Sequence  KSREYEQLKSEWAQRVNPEDLEFIRSTVLKD. VLRTDRAHPYYAGPEDGPHLRALHDLLT
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Template Sequence  LST. . . . . . . . . . SKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVR
Template Known Secondary structure  TT..........



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GGGSTT
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   828.830 .........840.........850.........860.........870.......
 
   374 .....380...... ...390.........400.........410.........420.........430.
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Query Sequence  T. YAVTHPQVSYCQ. GMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKF
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Template Sequence  ENWTHLLKKFDLGSYDIRMIISGTTAHFSSK. DKLQEVKLFFESLEA. QGSHLDIFQTVL
Template Known Secondary structure  S
TTSTTTTT

S.S
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   878.880.........890.........900........ .910.........920... ......930.....
 
   432.... ...440.........450..
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Query Sequence  AHLKL. . . LLRHADPDFYQYLQEA
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Template Sequence  ETITKNIKWLEKNLPTLRTWLMVN
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   936...940.........950.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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