1 c2g77A_
100.0
20
PDB header: hydrolase activator/protein transportChain: A: PDB Molecule: gtpase-activating protein gyp1;PDBTitle: crystal structure of gyp1 tbc domain in complex with rab332 gtpase bound to gdp and alf3
2 c2qfzB_
100.0
21
PDB header: hydrolase activatorChain: B: PDB Molecule: tbc1 domain family member 22a;PDBTitle: crystal structure of human tbc1 domain family member 22a
3 c4hlqE_
100.0
27
PDB header: hydrolase activator/protein transportChain: E: PDB Molecule: tbc1 domain family member 20;PDBTitle: crystal structure of human rab1b bound to gdp and bef3 in complex with2 the gap domain of tbc1d20 from homo sapiens
4 c2qq8A_
100.0
25
PDB header: hydrolase activatorChain: A: PDB Molecule: tbc1 domain family member 14;PDBTitle: crystal structure of the putative rabgap domain of human2 tbc1 domain family member 14
5 c3qyeA_
100.0
22
PDB header: hydrolase activatorChain: A: PDB Molecule: tbc1 domain family member 1;PDBTitle: crystal structure of human tbc1d1 rabgap domain
6 c3qybA_
100.0
23
PDB header: hydrolase activatorChain: A: PDB Molecule: tbc1 domain family member 4;PDBTitle: x-ray crystal structure of human tbc1d4 (as160) rabgap domain
7 d1fkma1
100.0
23
Fold: Left-handed superhelixSuperfamily: Ypt/Rab-GAP domain of gyp1pFamily: Ypt/Rab-GAP domain of gyp1p8 c3qwlA_
100.0
12
PDB header: hydrolase activatorChain: A: PDB Molecule: tbc1 domain family member 7;PDBTitle: crystal structure of human tbc1 domain family member 7
9 c3dzxA_
100.0
18
PDB header: hydrolase activatorChain: A: PDB Molecule: tbc1 domain family member 22b;PDBTitle: crystal structure of the rabgap domain of human tbc1d22b
10 c3hzjB_
100.0
24
PDB header: hydrolase activatorChain: B: PDB Molecule: rab gtpase-activating protein 1-like;PDBTitle: crystal structure of the rabgap domain of the rabgap1l2 protein
11 d1fkma2
99.6
17
Fold: Left-handed superhelixSuperfamily: Ypt/Rab-GAP domain of gyp1pFamily: Ypt/Rab-GAP domain of gyp1p12 d1wmha_
97.9
21
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain13 c2ktrA_
97.6
15
PDB header: signaling protein, transport proteinChain: A: PDB Molecule: sequestosome-1;PDBTitle: nmr structure of p62 pb1 dimer determined based on pcs
14 d2bkfa1
97.4
31
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain15 d1wj6a_
97.3
24
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain16 d1ip9a_
96.6
12
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain17 d1wmhb_
93.5
29
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain18 d2i1sa1
63.1
14
Fold: MM3350-likeSuperfamily: MM3350-likeFamily: MM3350-like19 c2c60A_
62.9
22
PDB header: transferaseChain: A: PDB Molecule: human mitogen-activated protein kinase kinasePDBTitle: crystal structure of human mitogen-activated protein kinase2 kinase kinase 3 isoform 2 phox domain at 1.25 a resolution
20 d2c60a1
62.6
22
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain21 c4gaoA_
not modelled
61.4
9
PDB header: ligase/peptideChain: A: PDB Molecule: dcn1-like protein 2;PDBTitle: dcnl complex with n-terminally acetylated nedd8 e2 peptide
22 d1jhda2
not modelled
55.0
23
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Nucleotidylyl transferaseFamily: ATP sulfurylase catalytic domain23 d2nptb1
not modelled
54.1
27
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain24 d1x6va2
not modelled
47.7
19
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Nucleotidylyl transferaseFamily: ATP sulfurylase catalytic domain25 c2qjfB_
not modelled
41.8
19
PDB header: transferaseChain: B: PDB Molecule: bifunctional 3'-phosphoadenosine 5'-PDBTitle: crystal structure of atp-sulfurylase domain of human paps2 synthetase 1
26 c1jhdA_
not modelled
41.1
23
PDB header: transferaseChain: A: PDB Molecule: sulfate adenylyltransferase;PDBTitle: crystal structure of bacterial atp sulfurylase from the2 riftia pachyptila symbiont
27 c2wo3B_
not modelled
38.3
24
PDB header: transferase/signaling proteinChain: B: PDB Molecule: ephrin-a2;PDBTitle: crystal structure of the epha4-ephrina2 complex
28 c3kevA_
not modelled
33.6
14
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: galieria sulfuraria dcun1 domain-containing protein;PDBTitle: x-ray crystal structure of a dcun1 domain-containing protein from2 galdieria sulfuraria
29 c1xjqA_
not modelled
30.0
19
PDB header: transferaseChain: A: PDB Molecule: bifunctional 3'-phosphoadenosine 5'-phosphosulfatePDBTitle: adp complex of human paps synthetase 1
30 c2v6zM_
not modelled
28.7
26
PDB header: transferaseChain: M: PDB Molecule: dna polymerase epsilon subunit 2;PDBTitle: solution structure of amino terminal domain of human dna2 polymerase epsilon subunit b
31 c3riuC_
not modelled
27.5
12
PDB header: hydrolaseChain: C: PDB Molecule: translin associated factor x, isoform b;PDBTitle: crystal structure of drosophila hexameric c3po formed by truncated2 translin and trax
32 d1u5ta1
not modelled
26.8
14
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: Vacuolar sorting protein domain33 c1xnjB_
not modelled
26.7
19
PDB header: transferaseChain: B: PDB Molecule: bifunctional 3'-phosphoadenosine 5'-phosphosulfatePDBTitle: aps complex of human paps synthetase 1
34 c2is9A_
not modelled
26.3
7
PDB header: transcriptionChain: A: PDB Molecule: defective in cullin neddylation protein 1;PDBTitle: structure of yeast dcn-1
35 c2js3B_
not modelled
25.7
60
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: uncharacterized protein;PDBTitle: nmr structure of protein q6n9a4_rhopa. northeast structural genomics2 consortium target rpt8
36 d1wgra_
not modelled
25.3
25
Fold: beta-Grasp (ubiquitin-like)Superfamily: Ubiquitin-likeFamily: Ras-binding domain, RBD37 d1x87a_
not modelled
25.2
24
Fold: UrocanaseSuperfamily: UrocanaseFamily: Urocanase38 d1erda_
not modelled
24.3
42
Fold: Protozoan pheromone-likeSuperfamily: Protozoan pheromone proteinsFamily: Protozoan pheromone proteins39 c1erdA_
not modelled
24.3
42
PDB header: pheromoneChain: A: PDB Molecule: pheromone er-2;PDBTitle: the nmr solution structure of the pheromone er-2 from the2 ciliated protozoan euplotes raikovi
40 d1pqsa_
not modelled
24.2
25
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain41 c2kc1A_
not modelled
23.3
12
PDB header: structural proteinChain: A: PDB Molecule: mkiaa1027 protein;PDBTitle: nmr structure of the f0 domain (residues 0-85) of the talin2 ferm domain
42 d1gtea5
not modelled
21.8
19
Fold: Ferredoxin-likeSuperfamily: 4Fe-4S ferredoxinsFamily: Ferredoxin domains from multidomain proteins43 d2cu1a1
not modelled
21.7
25
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain44 c4gbaA_
not modelled
20.8
10
PDB header: ligase/peptideChain: A: PDB Molecule: dcn1-like protein 3;PDBTitle: dcnl complex with n-terminally acetylated nedd8 e2 peptide
45 c3bq3A_
not modelled
20.1
8
PDB header: cell cycle, ligaseChain: A: PDB Molecule: defective in cullin neddylation protein 1;PDBTitle: crystal structure of s. cerevisiae dcn1
46 d1cexa_
not modelled
19.5
18
Fold: alpha/beta-HydrolasesSuperfamily: alpha/beta-HydrolasesFamily: Cutinase-like47 d1g8fa2
not modelled
18.6
31
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Nucleotidylyl transferaseFamily: ATP sulfurylase catalytic domain48 d1iyjb1
not modelled
18.6
30
Fold: BRCA2 helical domainSuperfamily: BRCA2 helical domainFamily: BRCA2 helical domain49 d1uwka_
not modelled
18.2
14
Fold: UrocanaseSuperfamily: UrocanaseFamily: Urocanase50 d1zkda1
not modelled
17.8
16
Fold: S-adenosyl-L-methionine-dependent methyltransferasesSuperfamily: S-adenosyl-L-methionine-dependent methyltransferasesFamily: RPA4359-like51 c2rdcA_
not modelled
17.6
24
PDB header: lipid binding proteinChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of a putative lipid binding protein (gsu0061) from2 geobacter sulfurreducens pca at 1.80 a resolution
52 d1m8pa2
not modelled
17.6
28
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Nucleotidylyl transferaseFamily: ATP sulfurylase catalytic domain53 c2r83B_
not modelled
17.4
19
PDB header: endocytosis, exocytosisChain: B: PDB Molecule: synaptotagmin-1;PDBTitle: crystal structure analysis of human synaptotagmin 1 c2a-c2b
54 c4f3nA_
not modelled
17.0
15
PDB header: unknown functionChain: A: PDB Molecule: uncharacterized acr, cog1565 superfamily;PDBTitle: high resolution native crystal structure of an uncharacterized acr,2 cog1565 superfamily protein from burkholderia thailandensis, solved3 by iodide ion sad
55 d1k28a1
not modelled
16.7
41
Fold: OB-foldSuperfamily: gp5 N-terminal domain-likeFamily: gp4 N-terminal domain-like56 c2fknC_
not modelled
15.8
17
PDB header: lyaseChain: C: PDB Molecule: urocanate hydratase;PDBTitle: crystal structure of urocanase from bacillus subtilis
57 d1xsva_
not modelled
15.6
25
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Sigma3 and sigma4 domains of RNA polymerase sigma factorsFamily: YlxM/p13-like58 d1v92a_
not modelled
15.4
44
Fold: RuvA C-terminal domain-likeSuperfamily: UBA-likeFamily: TAP-C domain-like59 c2datA_
not modelled
15.4
15
PDB header: transcriptionChain: A: PDB Molecule: possible global transcription activator snf2l2;PDBTitle: solution structure of the bromodomain of human swi/snf2 related matrix associated actin dependent regulator of3 cromatin subfamily a member 2
60 c1sghA_
not modelled
15.4
30
PDB header: structural proteinChain: A: PDB Molecule: moesin;PDBTitle: moesin ferm domain bound to ebp50 c-terminal peptide
61 c2h89B_
not modelled
15.1
24
PDB header: oxidoreductaseChain: B: PDB Molecule: succinate dehydrogenase ip subunit;PDBTitle: avian respiratory complex ii with malonate bound
62 c2l92A_
not modelled
14.6
54
PDB header: dna binding proteinChain: A: PDB Molecule: histone family protein nucleoid-structuring protein h-ns;PDBTitle: solution structure of the c-terminal domain of h-ns like protein bv3f
63 c3rjoA_
not modelled
14.3
10
PDB header: hydrolaseChain: A: PDB Molecule: endoplasmic reticulum aminopeptidase 1;PDBTitle: crystal structure of erap1 peptide binding domain
64 c2i1jA_
not modelled
14.3
25
PDB header: cell adhesion, membrane proteinChain: A: PDB Molecule: moesin;PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution
65 d1wt8a1
not modelled
13.9
80
Fold: Knottins (small inhibitors, toxins, lectins)Superfamily: Scorpion toxin-likeFamily: Short-chain scorpion toxins66 c3mzyA_
not modelled
13.4
11
PDB header: rna binding proteinChain: A: PDB Molecule: rna polymerase sigma-h factor;PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
67 d1n0ea_
not modelled
13.3
13
Fold: Double-split beta-barrelSuperfamily: AbrB/MazE/MraZ-likeFamily: Hypothetical protein MraZ68 c2g0bG_
not modelled
13.2
8
PDB header: transferaseChain: G: PDB Molecule: feem;PDBTitle: the structure of feem, an n-acyl amino acid synthase from uncultured2 soil microbes
69 c1n0fF_
not modelled
13.2
13
PDB header: biosynthetic proteinChain: F: PDB Molecule: protein mraz;PDBTitle: crystal structure of a cell division and cell wall2 biosynthesis protein upf0040 from mycoplasma pneumoniae:3 indication of a novel fold with a possible new conserved4 sequence motif
70 c3hugA_
not modelled
12.9
16
PDB header: transcription/membrane proteinChain: A: PDB Molecule: rna polymerase sigma factor;PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
71 c3vpbF_
not modelled
12.9
43
PDB header: ligaseChain: F: PDB Molecule: alpha-aminoadipate carrier protein lysw;PDBTitle: argx from sulfolobus tokodaii complexed with2 lysw/glu/adp/mg/zn/sulfate
72 c3axjB_
not modelled
11.9
17
PDB header: dna binding proteinChain: B: PDB Molecule: translin associated factor x, isoform b;PDBTitle: high resolution crystal structure of c3po
73 d3d7ca1
not modelled
11.7
13
Fold: Bromodomain-likeSuperfamily: BromodomainFamily: Bromodomain74 c2j89A_
not modelled
11.6
24
PDB header: oxidoreductaseChain: A: PDB Molecule: methionine sulfoxide reductase a;PDBTitle: functional and structural aspects of poplar cytosolic and2 plastidial type a methionine sulfoxide reductases
75 c2damA_
not modelled
11.4
20
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: etea protein;PDBTitle: solution structure of the novel identified uba-like domain2 in the n-terminal of human etea protein
76 c3vepA_
not modelled
11.3
19
PDB header: membrane protein/transcriptionChain: A: PDB Molecule: probable rna polymerase sigma-d factor;PDBTitle: crystal structure of sigd4 in complex with its negative regulator rsda
77 c3se6A_
not modelled
11.1
14
PDB header: hydrolaseChain: A: PDB Molecule: endoplasmic reticulum aminopeptidase 2;PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2
78 c4f5cA_
not modelled
11.0
11
PDB header: hydrolase/viral proteinChain: A: PDB Molecule: aminopeptidase n;PDBTitle: crystal structure of the spike receptor binding domain of a porcine2 respiratory coronavirus in complex with the pig aminopeptidase n3 ectodomain
79 c1a6cA_
not modelled
10.9
19
PDB header: virusChain: A: PDB Molecule: tobacco ringspot virus capsid protein;PDBTitle: structure of tobacco ringspot virus
80 d1s7oa_
not modelled
10.8
17
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Sigma3 and sigma4 domains of RNA polymerase sigma factorsFamily: YlxM/p13-like81 c1kilE_
not modelled
10.8
57
PDB header: membrane proteinChain: E: PDB Molecule: complexin i snare-complex binding region;PDBTitle: three-dimensional structure of the complexin/snare complex
82 d2hzaa1
not modelled
10.7
13
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like83 c3qztA_
not modelled
10.6
13
PDB header: transcription/nuclear proteinChain: A: PDB Molecule: nucleosome-remodeling factor subunit bptf;PDBTitle: crystal structure of bptf bromo in complex with histone h4k16ac - form2 ii
84 c1p0oA_
not modelled
10.5
21
PDB header: ribosomeChain: A: PDB Molecule: 19-mer peptide from 50s ribosomal protein l1;PDBTitle: hp (2-20) substitution of trp for gln and asp at position2 17 and 19 modification in sds-d25 micelles
85 c3hzuA_
not modelled
10.5
22
PDB header: transferaseChain: A: PDB Molecule: thiosulfate sulfurtransferase ssea;PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis
86 c3pilA_
not modelled
10.0
21
PDB header: oxidoreductaseChain: A: PDB Molecule: peptide methionine sulfoxide reductase;PDBTitle: crystal structure of mxr1 from saccharomyces cerevisiae in reduced2 form
87 d1shxa1
not modelled
9.7
27
Fold: Cupredoxin-likeSuperfamily: CupredoxinsFamily: Ephrin ectodomain88 c2x11B_
not modelled
9.7
27
PDB header: receptor/signaling proteinChain: B: PDB Molecule: ephrin-a5;PDBTitle: crystal structure of the complete epha2 ectodomain in2 complex with ephrin a5 receptor binding domain
89 c2emtB_
not modelled
9.5
30
PDB header: cell adhesionChain: B: PDB Molecule: radixin;PDBTitle: crystal structure analysis of the radixin ferm domain2 complexed with adhesion molecule psgl-1
90 c3fmxX_
not modelled
9.5
36
PDB header: oxidoreductaseChain: X: PDB Molecule: tartrate dehydrogenase/decarboxylase;PDBTitle: crystal structure of tartrate dehydrogenase from pseudomonas2 putida complexed with nadh
91 d1pugb_
not modelled
9.1
22
Fold: YbaB-likeSuperfamily: YbaB-likeFamily: YbaB-like92 c1gg3A_
not modelled
9.1
16
PDB header: membrane proteinChain: A: PDB Molecule: erythroid membrane protein 4.1r;PDBTitle: crystal structure of the protein 4.1r membrane binding2 domain
93 d1q1oa_
not modelled
8.9
23
Fold: beta-Grasp (ubiquitin-like)Superfamily: CAD & PB1 domainsFamily: PB1 domain94 d1miua1
not modelled
8.9
31
Fold: BRCA2 helical domainSuperfamily: BRCA2 helical domainFamily: BRCA2 helical domain95 d2f1ka1
not modelled
8.5
16
Fold: 6-phosphogluconate dehydrogenase C-terminal domain-likeSuperfamily: 6-phosphogluconate dehydrogenase C-terminal domain-likeFamily: TyrA dimerization domain-like96 c3zc1E_
not modelled
8.4
13
PDB header: hydrolaseChain: E: PDB Molecule: aftrax;PDBTitle: crystal structure of afc3po
97 c3nxbB_
not modelled
8.3
11
PDB header: transcriptionChain: B: PDB Molecule: cat eye syndrome critical region protein 2;PDBTitle: crystal structure of the bromodomain of human cecr2
98 d1c20a_
not modelled
8.2
13
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: ARID-likeFamily: ARID domain99 d2c5lc1
not modelled
8.1
21
Fold: beta-Grasp (ubiquitin-like)Superfamily: Ubiquitin-likeFamily: Ras-binding domain, RBD
