Emaill.a.kelley@imperial.ac.uk
DescriptionA1A5B6
DateWed Jul 10 14:22:24 BST 2013
Unique Job ID90d745b2bd215cf8

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2g77A_



100.0 20 PDB header:hydrolase activator/protein transport
Chain: A: PDB Molecule:gtpase-activating protein gyp1;
PDBTitle: crystal structure of gyp1 tbc domain in complex with rab332 gtpase bound to gdp and alf3
2c2qfzB_



100.0 21 PDB header:hydrolase activator
Chain: B: PDB Molecule:tbc1 domain family member 22a;
PDBTitle: crystal structure of human tbc1 domain family member 22a
3c4hlqE_



100.0 27 PDB header:hydrolase activator/protein transport
Chain: E: PDB Molecule:tbc1 domain family member 20;
PDBTitle: crystal structure of human rab1b bound to gdp and bef3 in complex with2 the gap domain of tbc1d20 from homo sapiens
4c2qq8A_



100.0 25 PDB header:hydrolase activator
Chain: A: PDB Molecule:tbc1 domain family member 14;
PDBTitle: crystal structure of the putative rabgap domain of human2 tbc1 domain family member 14
5c3qyeA_



100.0 22 PDB header:hydrolase activator
Chain: A: PDB Molecule:tbc1 domain family member 1;
PDBTitle: crystal structure of human tbc1d1 rabgap domain
6c3qybA_



100.0 23 PDB header:hydrolase activator
Chain: A: PDB Molecule:tbc1 domain family member 4;
PDBTitle: x-ray crystal structure of human tbc1d4 (as160) rabgap domain
7d1fkma1



100.0 23 Fold:Left-handed superhelix
Superfamily:Ypt/Rab-GAP domain of gyp1p
Family:Ypt/Rab-GAP domain of gyp1p
8c3qwlA_



100.0 12 PDB header:hydrolase activator
Chain: A: PDB Molecule:tbc1 domain family member 7;
PDBTitle: crystal structure of human tbc1 domain family member 7
9c3dzxA_



100.0 18 PDB header:hydrolase activator
Chain: A: PDB Molecule:tbc1 domain family member 22b;
PDBTitle: crystal structure of the rabgap domain of human tbc1d22b
10c3hzjB_



100.0 24 PDB header:hydrolase activator
Chain: B: PDB Molecule:rab gtpase-activating protein 1-like;
PDBTitle: crystal structure of the rabgap domain of the rabgap1l2 protein
11d1fkma2



99.6 17 Fold:Left-handed superhelix
Superfamily:Ypt/Rab-GAP domain of gyp1p
Family:Ypt/Rab-GAP domain of gyp1p
12d1wmha_



97.9 21 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
13c2ktrA_



97.6 15 PDB header:signaling protein, transport protein
Chain: A: PDB Molecule:sequestosome-1;
PDBTitle: nmr structure of p62 pb1 dimer determined based on pcs
14d2bkfa1



97.4 31 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
15d1wj6a_



97.3 24 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
16d1ip9a_



96.6 12 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
17d1wmhb_



93.5 29 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
18d2i1sa1



63.1 14 Fold:MM3350-like
Superfamily:MM3350-like
Family:MM3350-like
19c2c60A_



62.9 22 PDB header:transferase
Chain: A: PDB Molecule:human mitogen-activated protein kinase kinase
PDBTitle: crystal structure of human mitogen-activated protein kinase2 kinase kinase 3 isoform 2 phox domain at 1.25 a resolution
20d2c60a1



62.6 22 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
21c4gaoA_



not modelled 61.4 9 PDB header:ligase/peptide
Chain: A: PDB Molecule:dcn1-like protein 2;
PDBTitle: dcnl complex with n-terminally acetylated nedd8 e2 peptide
22d1jhda2



not modelled 55.0 23 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
23d2nptb1



not modelled 54.1 27 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
24d1x6va2



not modelled 47.7 19 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
25c2qjfB_



not modelled 41.8 19 PDB header:transferase
Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-
PDBTitle: crystal structure of atp-sulfurylase domain of human paps2 synthetase 1
26c1jhdA_



not modelled 41.1 23 PDB header:transferase
Chain: A: PDB Molecule:sulfate adenylyltransferase;
PDBTitle: crystal structure of bacterial atp sulfurylase from the2 riftia pachyptila symbiont
27c2wo3B_



not modelled 38.3 24 PDB header:transferase/signaling protein
Chain: B: PDB Molecule:ephrin-a2;
PDBTitle: crystal structure of the epha4-ephrina2 complex
28c3kevA_



not modelled 33.6 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:galieria sulfuraria dcun1 domain-containing protein;
PDBTitle: x-ray crystal structure of a dcun1 domain-containing protein from2 galdieria sulfuraria
29c1xjqA_



not modelled 30.0 19 PDB header:transferase
Chain: A: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate
PDBTitle: adp complex of human paps synthetase 1
30c2v6zM_



not modelled 28.7 26 PDB header:transferase
Chain: M: PDB Molecule:dna polymerase epsilon subunit 2;
PDBTitle: solution structure of amino terminal domain of human dna2 polymerase epsilon subunit b
31c3riuC_



not modelled 27.5 12 PDB header:hydrolase
Chain: C: PDB Molecule:translin associated factor x, isoform b;
PDBTitle: crystal structure of drosophila hexameric c3po formed by truncated2 translin and trax
32d1u5ta1



not modelled 26.8 14 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
33c1xnjB_



not modelled 26.7 19 PDB header:transferase
Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate
PDBTitle: aps complex of human paps synthetase 1
34c2is9A_



not modelled 26.3 7 PDB header:transcription
Chain: A: PDB Molecule:defective in cullin neddylation protein 1;
PDBTitle: structure of yeast dcn-1
35c2js3B_



not modelled 25.7 60 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of protein q6n9a4_rhopa. northeast structural genomics2 consortium target rpt8
36d1wgra_



not modelled 25.3 25 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
37d1x87a_



not modelled 25.2 24 Fold:Urocanase
Superfamily:Urocanase
Family:Urocanase
38d1erda_



not modelled 24.3 42 Fold:Protozoan pheromone-like
Superfamily:Protozoan pheromone proteins
Family:Protozoan pheromone proteins
39c1erdA_



not modelled 24.3 42 PDB header:pheromone
Chain: A: PDB Molecule:pheromone er-2;
PDBTitle: the nmr solution structure of the pheromone er-2 from the2 ciliated protozoan euplotes raikovi
40d1pqsa_



not modelled 24.2 25 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
41c2kc1A_



not modelled 23.3 12 PDB header:structural protein
Chain: A: PDB Molecule:mkiaa1027 protein;
PDBTitle: nmr structure of the f0 domain (residues 0-85) of the talin2 ferm domain
42d1gtea5



not modelled 21.8 19 Fold:Ferredoxin-like
Superfamily:4Fe-4S ferredoxins
Family:Ferredoxin domains from multidomain proteins
43d2cu1a1



not modelled 21.7 25 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
44c4gbaA_



not modelled 20.8 10 PDB header:ligase/peptide
Chain: A: PDB Molecule:dcn1-like protein 3;
PDBTitle: dcnl complex with n-terminally acetylated nedd8 e2 peptide
45c3bq3A_



not modelled 20.1 8 PDB header:cell cycle, ligase
Chain: A: PDB Molecule:defective in cullin neddylation protein 1;
PDBTitle: crystal structure of s. cerevisiae dcn1
46d1cexa_



not modelled 19.5 18 Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Cutinase-like
47d1g8fa2



not modelled 18.6 31 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
48d1iyjb1



not modelled 18.6 30 Fold:BRCA2 helical domain
Superfamily:BRCA2 helical domain
Family:BRCA2 helical domain
49d1uwka_



not modelled 18.2 14 Fold:Urocanase
Superfamily:Urocanase
Family:Urocanase
50d1zkda1



not modelled 17.8 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:RPA4359-like
51c2rdcA_



not modelled 17.6 24 PDB header:lipid binding protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative lipid binding protein (gsu0061) from2 geobacter sulfurreducens pca at 1.80 a resolution
52d1m8pa2



not modelled 17.6 28 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
53c2r83B_



not modelled 17.4 19 PDB header:endocytosis, exocytosis
Chain: B: PDB Molecule:synaptotagmin-1;
PDBTitle: crystal structure analysis of human synaptotagmin 1 c2a-c2b
54c4f3nA_



not modelled 17.0 15 PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized acr, cog1565 superfamily;
PDBTitle: high resolution native crystal structure of an uncharacterized acr,2 cog1565 superfamily protein from burkholderia thailandensis, solved3 by iodide ion sad
55d1k28a1



not modelled 16.7 41 Fold:OB-fold
Superfamily:gp5 N-terminal domain-like
Family:gp4 N-terminal domain-like
56c2fknC_



not modelled 15.8 17 PDB header:lyase
Chain: C: PDB Molecule:urocanate hydratase;
PDBTitle: crystal structure of urocanase from bacillus subtilis
57d1xsva_



not modelled 15.6 25 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
58d1v92a_



not modelled 15.4 44 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:TAP-C domain-like
59c2datA_



not modelled 15.4 15 PDB header:transcription
Chain: A: PDB Molecule:possible global transcription activator snf2l2;
PDBTitle: solution structure of the bromodomain of human swi/snf2 related matrix associated actin dependent regulator of3 cromatin subfamily a member 2
60c1sghA_



not modelled 15.4 30 PDB header:structural protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin ferm domain bound to ebp50 c-terminal peptide
61c2h89B_



not modelled 15.1 24 PDB header:oxidoreductase
Chain: B: PDB Molecule:succinate dehydrogenase ip subunit;
PDBTitle: avian respiratory complex ii with malonate bound
62c2l92A_



not modelled 14.6 54 PDB header:dna binding protein
Chain: A: PDB Molecule:histone family protein nucleoid-structuring protein h-ns;
PDBTitle: solution structure of the c-terminal domain of h-ns like protein bv3f
63c3rjoA_



not modelled 14.3 10 PDB header:hydrolase
Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1;
PDBTitle: crystal structure of erap1 peptide binding domain
64c2i1jA_



not modelled 14.3 25 PDB header:cell adhesion, membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution
65d1wt8a1



not modelled 13.9 80 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
66c3mzyA_



not modelled 13.4 11 PDB header:rna binding protein
Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
67d1n0ea_



not modelled 13.3 13 Fold:Double-split beta-barrel
Superfamily:AbrB/MazE/MraZ-like
Family:Hypothetical protein MraZ
68c2g0bG_



not modelled 13.2 8 PDB header:transferase
Chain: G: PDB Molecule:feem;
PDBTitle: the structure of feem, an n-acyl amino acid synthase from uncultured2 soil microbes
69c1n0fF_



not modelled 13.2 13 PDB header:biosynthetic protein
Chain: F: PDB Molecule:protein mraz;
PDBTitle: crystal structure of a cell division and cell wall2 biosynthesis protein upf0040 from mycoplasma pneumoniae:3 indication of a novel fold with a possible new conserved4 sequence motif
70c3hugA_



not modelled 12.9 16 PDB header:transcription/membrane protein
Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
71c3vpbF_



not modelled 12.9 43 PDB header:ligase
Chain: F: PDB Molecule:alpha-aminoadipate carrier protein lysw;
PDBTitle: argx from sulfolobus tokodaii complexed with2 lysw/glu/adp/mg/zn/sulfate
72c3axjB_



not modelled 11.9 17 PDB header:dna binding protein
Chain: B: PDB Molecule:translin associated factor x, isoform b;
PDBTitle: high resolution crystal structure of c3po
73d3d7ca1



not modelled 11.7 13 Fold:Bromodomain-like
Superfamily:Bromodomain
Family:Bromodomain
74c2j89A_



not modelled 11.6 24 PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine sulfoxide reductase a;
PDBTitle: functional and structural aspects of poplar cytosolic and2 plastidial type a methionine sulfoxide reductases
75c2damA_



not modelled 11.4 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:etea protein;
PDBTitle: solution structure of the novel identified uba-like domain2 in the n-terminal of human etea protein
76c3vepA_



not modelled 11.3 19 PDB header:membrane protein/transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-d factor;
PDBTitle: crystal structure of sigd4 in complex with its negative regulator rsda
77c3se6A_



not modelled 11.1 14 PDB header:hydrolase
Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 2;
PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2
78c4f5cA_



not modelled 11.0 11 PDB header:hydrolase/viral protein
Chain: A: PDB Molecule:aminopeptidase n;
PDBTitle: crystal structure of the spike receptor binding domain of a porcine2 respiratory coronavirus in complex with the pig aminopeptidase n3 ectodomain
79c1a6cA_



not modelled 10.9 19 PDB header:virus
Chain: A: PDB Molecule:tobacco ringspot virus capsid protein;
PDBTitle: structure of tobacco ringspot virus
80d1s7oa_



not modelled 10.8 17 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
81c1kilE_



not modelled 10.8 57 PDB header:membrane protein
Chain: E: PDB Molecule:complexin i snare-complex binding region;
PDBTitle: three-dimensional structure of the complexin/snare complex
82d2hzaa1



not modelled 10.7 13 Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:CopG-like
83c3qztA_



not modelled 10.6 13 PDB header:transcription/nuclear protein
Chain: A: PDB Molecule:nucleosome-remodeling factor subunit bptf;
PDBTitle: crystal structure of bptf bromo in complex with histone h4k16ac - form2 ii
84c1p0oA_



not modelled 10.5 21 PDB header:ribosome
Chain: A: PDB Molecule:19-mer peptide from 50s ribosomal protein l1;
PDBTitle: hp (2-20) substitution of trp for gln and asp at position2 17 and 19 modification in sds-d25 micelles
85c3hzuA_



not modelled 10.5 22 PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis
86c3pilA_



not modelled 10.0 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase;
PDBTitle: crystal structure of mxr1 from saccharomyces cerevisiae in reduced2 form
87d1shxa1



not modelled 9.7 27 Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Ephrin ectodomain
88c2x11B_



not modelled 9.7 27 PDB header:receptor/signaling protein
Chain: B: PDB Molecule:ephrin-a5;
PDBTitle: crystal structure of the complete epha2 ectodomain in2 complex with ephrin a5 receptor binding domain
89c2emtB_



not modelled 9.5 30 PDB header:cell adhesion
Chain: B: PDB Molecule:radixin;
PDBTitle: crystal structure analysis of the radixin ferm domain2 complexed with adhesion molecule psgl-1
90c3fmxX_



not modelled 9.5 36 PDB header:oxidoreductase
Chain: X: PDB Molecule:tartrate dehydrogenase/decarboxylase;
PDBTitle: crystal structure of tartrate dehydrogenase from pseudomonas2 putida complexed with nadh
91d1pugb_



not modelled 9.1 22 Fold:YbaB-like
Superfamily:YbaB-like
Family:YbaB-like
92c1gg3A_



not modelled 9.1 16 PDB header:membrane protein
Chain: A: PDB Molecule:erythroid membrane protein 4.1r;
PDBTitle: crystal structure of the protein 4.1r membrane binding2 domain
93d1q1oa_



not modelled 8.9 23 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
94d1miua1



not modelled 8.9 31 Fold:BRCA2 helical domain
Superfamily:BRCA2 helical domain
Family:BRCA2 helical domain
95d2f1ka1



not modelled 8.5 16 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:TyrA dimerization domain-like
96c3zc1E_



not modelled 8.4 13 PDB header:hydrolase
Chain: E: PDB Molecule:aftrax;
PDBTitle: crystal structure of afc3po
97c3nxbB_



not modelled 8.3 11 PDB header:transcription
Chain: B: PDB Molecule:cat eye syndrome critical region protein 2;
PDBTitle: crystal structure of the bromodomain of human cecr2
98d1c20a_



not modelled 8.2 13 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:ARID-like
Family:ARID domain
99d2c5lc1



not modelled 8.1 21 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD