01/08/2013 11:05:22 : INFO  : Run start: Thu Aug  1 11:05:22 BST 2013
01/08/2013 11:05:22 : INFO  : Initialised job
01/08/2013 11:05:22 : INFO  : Initialised job:
Sequence
>batch____
MSGCCCSRKCPSLPAISLCSTEVSCGGPVCLPSSCRSQTWQLVTCEDSCGSSGCGSQCCQ
PSCSVSSCCQPVCCEATICEPSCSVSSCAQPVCCEATICEPSCSMGSCCQPVCCEATICE
PSCSVSTCAQPVCCEATMCQPSCSVSSCQPVCCETSSCQPVLCLPATCQPVICKPCCCQP
VICEPSCCSAVCAVPASCQPMICEPVVCEPACCQPVCPTPSCCPSVCSAASSCQPVGCET
SPCEPPCSEASACQPSACMALVCEPVCLRPVCCVQGPCEPPCVSSSCQDSSCCVSSICQP
VCPEPSPCLPSVCVPTPCQPSCYIVKRCRSVSCEPISCPSPSCQPACCRPGSSASAICQP
ACPPRTFYIPSSCKPPCSPVSCRPICRPICSGPITFRQPYVTSITYRPACYRSCYSILRR
PTCLASYSYRPVCSRQPCTDSDNDKCDSKKPTSSQPDCADSTPVKTEVSDETPCQPSEIK
PASPITREAAAPQPAASKPADR

01/08/2013 11:05:22 : INFO  : Checked sequence
01/08/2013 11:05:22 : INFO  : Finding homologues with PSI-BLAST
01/08/2013 11:05:22 : INFO  : PSI-BLAST 3 iterations
01/08/2013 11:09:59 : INFO  : PSI-BLAST 5 iterations
01/08/2013 11:24:37 : INFO  : Finished PSI-BLAST
01/08/2013 11:24:37 : INFO  : Running Buildali to generate a3m file
01/08/2013 12:03:34 : INFO  : Converting to HMM
01/08/2013 12:03:37 : INFO  : Calibrating HMM
01/08/2013 12:03:46 : INFO  : Searching HMM database
01/08/2013 12:18:57 : INFO  : Finished buildali
01/08/2013 12:18:57 : INFO  : Predicting secondary structure
01/08/2013 12:18:57 : INFO  : Predicted secondary structure (PSI-Pred)
01/08/2013 12:18:57 : INFO  : Predicting Disordered regions
01/08/2013 12:18:57 : INFO  : Predicted Disorder (Disopred)
01/08/2013 12:18:57 : INFO  : Running memsat_svm check
01/08/2013 12:23:10 : INFO  : Globular protein
01/08/2013 12:23:10 : INFO  : Predicted Transmembrane (memsat_svm) ID '6d16f69d7886b479'
01/08/2013 12:23:10 : INFO  : Initialising fold library search
01/08/2013 12:23:11 : INFO  : Initialised search input
01/08/2013 12:23:11 : INFO  : Building Ensemble models
01/08/2013 12:23:11 : INFO  : Building hh.d1f7ea_.model.1.pdb
01/08/2013 12:23:12 : INFO  : Building d1f7ea_.1.pdb
01/08/2013 12:23:12 : INFO  : Building d1danl1.2.pdb
01/08/2013 12:23:13 : INFO  : Building d1dval1.3.pdb
01/08/2013 12:23:13 : INFO  : Building d2vj3a2.4.pdb
01/08/2013 12:23:14 : INFO  : Building d1edmb_.5.pdb
01/08/2013 12:23:14 : INFO  : Building d1g1ta2.6.pdb
01/08/2013 12:23:15 : INFO  : Building d1g1sa2.7.pdb
01/08/2013 12:23:17 : INFO  : Building c2rqzA_.8.pdb
01/08/2013 12:23:17 : INFO  : Building c1fygA_.9.pdb
01/08/2013 12:23:17 : INFO  : Building c1tt3A_.10.pdb
01/08/2013 12:23:18 : INFO  : Building c1mviA_.11.pdb
01/08/2013 12:23:18 : INFO  : Building c1ttkA_.12.pdb
01/08/2013 12:23:18 : INFO  : Building c1dw5A_.13.pdb
01/08/2013 12:23:19 : INFO  : Building c1dw4A_.14.pdb
01/08/2013 12:23:19 : INFO  : Building c1omgA_.15.pdb
01/08/2013 12:23:20 : INFO  : Building d2vj3a3.16.pdb
01/08/2013 12:23:20 : INFO  : Building c1feoA_.17.pdb
01/08/2013 12:23:20 : INFO  : Building c2km9A_.18.pdb
01/08/2013 12:23:21 : INFO  : Building d1pfxl1.19.pdb
01/08/2013 12:23:21 : INFO  : Building d2c4fl1.20.pdb
01/08/2013 12:23:22 : INFO  : Finished HH model building
01/08/2013 12:23:22 : WARN  : Set python to /bmm/www/servers/phyre2/bin//python2.7/2.7.2/bin/python2.7
01/08/2013 12:23:29 : INFO  : html domain output complete ID '6d16f69d7886b479'
01/08/2013 12:24:06 : INFO  : Run end  : Thu Aug  1 12:24:06 BST 2013
