Job Description A1A546 Confidence 64.66% Date Wed Jul 10 14:42:12 BST 2013 Rank 126 Aligned Residues 49 % Identity 8% Template c3vepA_ PDB info PDB header:membrane protein/transcription Chain: A: PDB Molecule:probable rna polymerase sigma-d factor; PDBTitle: crystal structure of sigd4 in complex with its negative regulator rsda Resolution 2.50 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	Q	E	L	E	K	L	F	H	F	T	H	Y	P	D	I	H	V	R	S	Q	L	A	S	R	I	N	L	P	E	A	R	V	Q	I	W	F	Q	N	Q	R	A	K	W	R	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	L	P	A	K	Q	R	E	I	L	I	L	R	V	V	V	G	L	S	A	E	E	T	A	A	A	V	G	S	T	T	G	A	V	R	V	A	Q	H	R	A	L	Q	R	L	K	D	E
Template Known Secondary structure				S													T	T												T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D