Job Description A1A546 Confidence 99.79% Date Wed Jul 10 14:42:12 BST 2013 Rank 46 Aligned Residues 64 % Identity 23% Template c3l1pA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex Resolution 2.80 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	E	K	K	N	K	R	R	V	R	T	T	F	T	T	E	Q	L	Q	E	L	E	K	L	F	H	F	T	H	Y	P	D	I	H	V	R	S	Q	L	A	S	R	I	N	L	P	E	A	R	V	Q	I	W	F	Q	N	Q	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	S	V	Q	A	R	K	R	K	R	T	S	I	E	N	R	V	R	W	S	L	E	T	M	F	L	K	S	P	K	P	S	L	Q	Q	I	T	H	I	A	N	Q	L	G	L	E	K	D	V	V	R	V	W	F	S	N	R	R	Q
Template Known Secondary structure		S						S																	T	T	T	T	T		S														T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		132	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D