Job Description A1A546 Confidence 99.81% Date Wed Jul 10 14:42:12 BST 2013 Rank 34 Aligned Residues 64 % Identity 27% Template c3d1nK_ PDB info PDB header:transcription regulator/dna Chain: K: PDB Molecule:pou domain, class 6, transcription factor 1; PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter Resolution 2.51 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	E	K	K	N	K	R	R	V	R	T	T	F	T	T	E	Q	L	Q	E	L	E	K	L	F	H	F	T	H	Y	P	D	I	H	V	R	S	Q	L	A	S	R	I	N	L	P	E	A	R	V	Q	I	W	F	Q	N	Q	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	E	P	S	K	K	R	K	R	R	T	S	F	T	P	Q	A	I	E	A	L	N	A	Y	F	E	K	N	P	L	P	T	G	Q	E	I	T	E	X	A	K	E	L	N	Y	D	R	E	V	V	R	V	W	F	S	N	R	R	Q
Template Known Secondary structure			S	S																											S	S													T	T	S														T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		132	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	K	N
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D