Job Description A1A546 Confidence 99.88% Date Wed Jul 10 14:42:12 BST 2013 Rank 1 Aligned Residues 79 % Identity 35% Template c2dmtA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein barh-like 1; PDBTitle: solution structure of the homeobox domain of homeobox2 protein barh-like 1 Resolution UNK Model Dimensions (Å) X:40.364 Y:48.030 Z:44.361

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	E	R	P	P	Q	D	Q	P	Q	E	E	K	K	N	K	R	R	V	R	T	T	F	T	T	E	Q	L	Q	E	L	E	K	L	F	H	F	T	H	Y	P	D	I	H	V	R	S	Q	L	A	S	R	I	N	L	P	E	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	S	G	S	S	G	G	E	P	G	T	K	A	K	K	G	R	R	S	R	T	V	F	T	E	L	Q	L	M	G	L	E	K	R	F	E	K	Q	K	Y	L	S	T	P	D	R	I	D	L	A	E	S	L	G	L	S	Q	L	Q
Template Known Secondary structure											S										S																				S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	I	W	F	Q	N	Q	R	A	K	W	R	K	Q	E	K	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	T	W	Y	Q	N	R	R	M	K	W	K	K	S	G	P	S	S
Template Known Secondary structure														S				S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D