Job Description A1A546 Confidence 99.83% Date Wed Jul 10 14:42:12 BST 2013
Rank 22 Aligned Residues 68
% Identity 31% Template c2l9rA_
PDB info
PDB header: transcriptionChain: A: PDB Molecule: homeobox protein nkx-3.1;
PDBTitle: solution nmr structure of homeobox domain of homeobox protein nkx-3.12 from homo sapiens, northeast structural genomics consortium target3 hr6470a
Resolution UNK
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
76 . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
K N K R R V R T T F T T E Q L Q E L E K L F H F T H Y P D I H V R S Q L A S R I N L P E A R V Q I W F Q N Q R A K W R K
Query Conservation  
                                                                                 
Alig confidence  
Template Conservation  
                                                                   
Template Sequence  
G H H H H H H S H M S H T Q V I E L E R K F S H Q K Y L S A P E R A H L A K N L K L T E T Q V K I W F Q N R R Y K T K R
Template Known Secondary structure  
S S S S T T S
Template Predicted Secondary structure  
Template SS confidence  
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 .
 
   
136 . . . 140 . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
Q E K S G N L S
Query Conservation  
               
Alig confidence  
Template Conservation  
             
Template Sequence  
K Q L S S E L G
Template Known Secondary structure  
S S S S
Template Predicted Secondary structure  
Template SS confidence  
   
62 . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
 
Phyre2 is part of Genome3D