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Job DescriptionA1A546
Confidence81.29%DateWed Jul 10 14:42:12 BST 2013
Rank108Aligned Residues46
% Identity13%Templatec3vdoA_
PDB info PDB header:dna binding protein/protein bindingChain: A: PDB Molecule:rna polymerase sigma factor sigk; PDBTitle: structure of extra-cytoplasmic function(ecf) sigma factor sigk in2 complex with its negative regulator rska from mycobacterium3 tuberculosis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130.....
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Query Sequence  FTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRK
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Template Sequence  LTDTQRQCIELAYYGGL. . . . . TYVEVSRRLAANLSTIKSRMRDALRSLRN
Template Known Secondary structure  S
TS

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T

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   137..140.........150... ......160.........170.........180..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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