Return to main results Retrieve Phyre Job Id

Job DescriptionA1A546
Confidence29.14%DateWed Jul 10 14:42:12 BST 2013
Rank234Aligned Residues45
% Identity13%Templated2cqqa1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Myb/SANT domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100.........110.........120.......
Predicted Secondary structure 











Query SS confidence 












































Query Sequence  TTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQ
Query Conservation 
  
  
   
   
     
       

    
    
  


Alig confidence 












































Template Conservation   


 

   
  

 


 

  

  

  



  

    
Template Sequence  PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAK
Template Known Secondary structure 



S
TT
TTTS
Template Predicted Secondary structure 











Template SS confidence 












































   910.........20.........30.........40.........50...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D