Return to main results Retrieve Phyre Job Id

Job DescriptionA1A546
Confidence22.69%DateWed Jul 10 14:42:12 BST 2013
Rank274Aligned Residues15
% Identity13%Templated1l0oc_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120...
Predicted Secondary structure 


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Query Sequence  SQLASRINLPEARVQ
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Template Conservation 



  
 
  


 
Template Sequence  TEIADHLGISPEDVV
Template Known Secondary structure  TS
Template Predicted Secondary structure 


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   136...140.........150
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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