Return to main results Retrieve Phyre Job Id

Job DescriptionA1A546
Confidence99.68%DateWed Jul 10 14:42:12 BST 2013
Rank78Aligned Residues57
% Identity25%Templatec2xsdC_
PDB info PDB header:transcription/dnaChain: C: PDB Molecule:pou domain, class 3, transcription factor 1; PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130.....
Predicted Secondary structure 
















Query SS confidence 
























































Query Sequence  RRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRK
Query Conservation 

 

  
  
   
   
     
       

    
    
  



 
 
   
Alig confidence 
























































Template Conservation 
  
 

       

  
     

  
   

  
 
    
  

 


 
 

Template Sequence  LEETDSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKR
Template Known Secondary structure 




SS

T

TB
Template Predicted Secondary structure 
















Template SS confidence 
























































   315....320.........330.........340.........350.........360.........370.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D