Return to main results Retrieve Phyre Job Id

Job DescriptionA1A546
Confidence99.74%DateWed Jul 10 14:42:12 BST 2013
Rank64Aligned Residues57
% Identity30%Templatec2h8rA_
PDB info PDB header:transcription activator/dnaChain: A: PDB Molecule:hepatocyte nuclear factor 1-beta; PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110......
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Query Sequence  EKKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRIN. . . . . . . . . . . . . . . . .
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Template Sequence  NQTVMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGL
Template Known Secondary structure  TT











SS

TT

STTGGGG
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   184.....190.........200.........210.........220.........230.........240...
 
   117..120.........130
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Query Sequence  . . . . LPEARVQIWFQNQR
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Template Sequence  GSNLVTEVRVYNWFANRR
Template Known Secondary structure  TTS


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   287..290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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