Return to main results Retrieve Phyre Job Id

Job DescriptionA1A546
Confidence99.80%DateWed Jul 10 14:42:12 BST 2013
Rank41Aligned Residues59
% Identity42%Templated1ztra1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120.........130.....
Predicted Secondary structure 


















Query SS confidence 


























































Query Sequence  NKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRK
Query Conservation    

 

  
  
   
   
     
       

    
    
  



 
 
   
Alig confidence 


























































Template Conservation    

 
  

  
   

  
  
 


   
  

  
 

   
  





 
 

Template Sequence  DEKRPRTAFSSEQLARAKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIRR
Template Known Secondary structure 




SSS
SSTTTSTT

TTSS

Template Predicted Secondary structure 



















Template SS confidence 


























































   0.........10.........20.........30.........40.........50........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D