Return to main results Retrieve Phyre Job Id

Job DescriptionA1A546
Confidence99.80%DateWed Jul 10 14:42:12 BST 2013
Rank42Aligned Residues62
% Identity26%Templated1gt0c1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
Resolution2.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120.........130...
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Query Sequence  EKKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKW
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Template Sequence  GLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFSNRRQKE
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S


T

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   97..100.........110.........120.........130.........140.........150......
 
   134.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  RK
Query Conservation    
Alig confidence 

Template Conservation 

Template Sequence  KR
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 

   157.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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