Job Description A1A546 Confidence 21.17% Date Wed Jul 10 14:42:12 BST 2013
Rank 286 Aligned Residues 29
% Identity 14% Template c2zkqm_
PDB info
PDB header: ribosomal protein/rnaChain: M: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
Resolution 8.70 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
102 . . . . . . . 110 . . . . .
. . . . 120 . . . . . . . . . 130
Predicted Secondary structure  
.
Query SS confidence  
.
Query Sequence  
Y P D I H V R S Q L A S R I .
N L P E A R V Q I W F Q N Q R
Query Conservation  
                      .                
Alig confidence  
.
Template Conservation  
                                     
Template Sequence  
E L T E D E V E R V I T I M Q N P R Q Y K I P D W F L N R Q
Template Known Secondary structure  
T S T T S S S S S S
Template Predicted Secondary structure  
Template SS confidence  
   
58 . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
 
Phyre2 is part of Genome3D