 |
Job Description | A1A546 | Confidence | 99.78% | Date | Wed Jul 10 14:42:12 BST 2013 |
Rank | 50 | Aligned Residues | 69 |
% Identity | 20% | Template | c2dn0A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 3; |
PDBTitle: solution structure of the second homeobox domain of human2 zinc fingers and homeoboxes protein 3
|
Resolution | UNK |
|
 |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | E | K | K | N | K | R | R | V | R | T | T | F | T | T | E | Q | L | Q | E | L | E | K | L | F | H | F | T | H | Y | P | D | I | H | V | R | S | Q | L | A | S | R | I | N | L | P | E | A | R | V | Q | I | W | F | Q | N | Q | R | A |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |
Template Sequence |   |
S | S | G | S | S | G | A | S | I | Y | K | N | K | K | S | H | E | Q | L | S | A | L | K | G | S | F | C | R | N | Q | F | P | G | Q | S | E | V | E | H | L | T | K | V | T | G | L | S | T | R | E | V | R | K | W | F | S | D | R | R | Y |
Template Known Secondary structure |   |
|
| S |
| S |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
  |   |
132 | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | W | R | K | Q | E | K | S | G |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
H | C | R | N | L | K | G | S | R |
Template Known Secondary structure |   |
 | S | S | S |
|
| S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|