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Job Description | A2A5E6 | Confidence | 44.99% | Date | Wed Jul 10 14:22:42 BST 2013 |
Rank | 221 | Aligned Residues | 39 |
% Identity | 18% | Template | c2iykB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:regulator of nonsense transcripts 1; |
PDBTitle: crystal structure of the upf2-interacting domain of2 nonsense mediated mrna decay factor upf1
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Resolution | 2.95 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | K | L | F | I | S | C | N | I | C | H | L | R | F | . |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | A | C | V | V | Y | C | N | T | S | K | K | W | F | C | N | G | R | G | N | T | S | G | S | H | I | V | N | H | L | V | R | A | K | C | K | E | V | T | L | H | K | D | G | P | L | G | E | T | V | L | E | C | Y | N | C | G |
Template Known Secondary structure |   |
T | T | T |  |  |  |  | T | T | T | T |  |  |  |  | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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