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Job DescriptionA2A5E6
Confidence98.47%DateWed Jul 10 14:22:42 BST 2013
Rank31Aligned Residues62
% Identity18%Templatec2drpD_
PDB info PDB header:transcription/dnaChain: D: PDB Molecule:protein (tramtrack dna-binding domain); PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   221........230.........240.........250.........260.........270.........280
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Query Sequence  GRGEKGRLYCPTCKVTVNSASQLQAHNTGAKHRWMVEGHQGAPRRGRGRPVSRGGTGHKT
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Template Sequence  TKEGEHTYRCKVCSRVYTHISNFCRHYVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTTT

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   104.....110.........120.........130..
 
   281........290.........300.........310.........320..
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Query Sequence  KRVIGNRGGRQGPSPPFHCALCQLHVNSETQLKQHMSSRRHK
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Template Sequence  . . . . . . . . SHKRNVKVYPCPFCFKEFTRKDNMTAHVK. IIHK
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   133......140.........150.........160. ....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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