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Job DescriptionA2A5E6
Confidence99.11%DateWed Jul 10 14:22:42 BST 2013
Rank5Aligned Residues132
% Identity14%Templatec2rpcA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:zinc finger protein zic 3; PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3
ResolutionUNK
Model Dimensions (Å)X:53.146 Y:70.908 Z:35.034

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90........ .100.........110.........120...
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Query Sequence  FGVPSPLKKKLFISCNICHLRFNSANQAEAHYKG. HRHARKLKAVEAAKSKQRPRNPTTN
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Template Sequence  LSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY. . . . . . . . . . . .
Template Known Secondary structure  B


B

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   14.....20.........30.........40.........50.........60.
 
   124.....130.........140.........150.........160.........170.........180...
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Query Sequence  GTVVSSASPPASGSPGTPQSKGPASPPLGPSLQLPPTPDPSAGDPVHSAGDPVHSELCDA
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   184.....190.........200.........210.........220.........230.........240...
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Query Sequence  AASSSSSSCPPCSPDPSREAPGPEPAEGAVGSGVNGEGRGEKGRLYCPTCKVTVNSASQL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WEECPREGKSFKAKYKL
Template Known Secondary structure  ...........................................BTT
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   62.......70........
 
   244.....250.........260.........270.........280.........290.........300...
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Query Sequence  QAHNTGAKHRWMVEGHQGAPRRGRGRPVSRGGTGHKTKRVIGNRGGRQGPSPPFHCALCQ
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Template Sequence  VNHIRV. . . . . . . . . HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCD
Template Known Secondary structure  T.........


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   7980.... .....90.........100.........110.........120.........
 
   304.....310.........320
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Query Sequence  LHVNSETQLKQHMSSRR
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Template Conservation 
 
     
  
   

Template Sequence  RRFANSSDRKKHMHVHT
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   130.........140......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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