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Job Description | A2A5E6 | Confidence | 98.65% | Date | Wed Jul 10 14:22:42 BST 2013 |
Rank | 21 | Aligned Residues | 83 |
% Identity | 11% | Template | c4f6nA_ |
PDB info |
PDB header:dna binding protein/dna | Chain: A: PDB Molecule:transcriptional regulator kaiso; |
PDBTitle: crystal structure of kaiso zinc finger dna binding protein in complex2 with methylated cpg site dna
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Resolution | 2.80 Å |
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222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | G | E | K | G | R | L | Y | C | P | T | C | K | V | T | V | N | S | A | S | Q | L | Q | A | H | N | T | G | A | K | H | R | W | M | V | E | G | H | Q | G | A | P | R | R | G | R | G | R | P | V | S | R | G | G | T | G | H | K | T | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | D | G | R | V | Y | Y | I | C | I | V | C | K | R | S | Y | V | C | L | T | S | L | R | R | H | F | N | . |
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I | H | S | W | E | K | K | Y | P | C | R | Y | C | E | K | V | F | P | L | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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488 | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | |
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. | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . |
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282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | V | I | G | N | R | G | G | R | Q | G | P | S | P | P | F | H | C | A | L | C | Q | L | H | V | N | S | E | T | Q | L | K | Q | H | M | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | Y | R | T | K | H | E | I | H | H | T | G | E | R | R | Y | Q | C | L | A | C | G | K | S | F | I | N | Y | Q | F | M | S | S | H | I | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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535 | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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