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Job DescriptionA2A5E6
Confidence99.63%DateWed Jul 10 14:22:42 BST 2013
Rank1Aligned Residues211
% Identity9%Templatec4ijdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9; PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9
Resolution2.15 Å
Model Dimensions (Å)X:56.508 Y:54.708 Z:39.739

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130
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Query Sequence  LKKKLFISCNICHLRFNSANQAEAHYKGHRHARKLKAVEAAKSKQRPRNPTTNGTVVSSA
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Template Sequence  PQDDDYLYCEXCQNFFIDSCAAHGPPT. FVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQ
Template Known Secondary structure 

GGG
TTTTSSSBTTTB


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TT
TTT

TT
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   197..200.........210.........220... ......230.........240.........250.....
 
   131........140.........150.........160.........170.........180.........190
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Query Sequence  SPPASGSPGTPQSKGPASPPLGPSLQLPPTPDPSAGDPVHSAGDPVHSELCDAAASSSSS
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Template Sequence  AGLGVWNEASDLPLGLHFGPY. . . . . . . . . . . . . . . . . . . . . . . . . EGRITEDEEAANNG
Template Known Secondary structure 


SS
B
TT



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S

GGGTTSS
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   256...260.........270...... ...280.........290
 
   191........200.........210.........220.........230.........240.........250
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Query Sequence  SCPPCSPDPSREAPGPEPAEGAVGSGVNGEGRGEKGRLYCPTCKVTVNSASQLQAHNTGA
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Template Sequence  YSWLITKGRNCYEYVDGKDKSWANWXRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIR. .
Template Known Secondary structure  STT

STTTS
GGGG

SSTTT

TTSS
B
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   291........300.........310.........320.........330.........340........
 
   251........260.........270.........280.........290.........300.........310
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Query Sequence  KHRWMVEGHQGAPRRGRGRPVSRGGTGHKTKRVIGNRGGRQGPSPPFHCALCQLHVNSET
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Template Sequence  . . . . . . . . . . . PGCELLVWYGDEYGQELGIKWGSKWKKELXPKPEIHPCPSCCLAFSSQK
Template Known Secondary structure  ...........TT
B


TTSTTTS







SSSS
SS
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   349350.........360.........370.........380.........390.......
 
   311........320
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Query Sequence  QLKQHMSSRR
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Template Conservation   
  
 
  
Template Sequence  FLSQHVERNH
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   402.......410.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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