Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5E6
Confidence44.99%DateWed Jul 10 14:22:42 BST 2013
Rank221Aligned Residues39
% Identity18%Templatec2iykB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the upf2-interacting domain of2 nonsense mediated mrna decay factor upf1
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80...... ...90.........100.... .....110.
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Query Sequence  KKLFISCNICHLRF. . . . . . NSANQAEAHYKGHRHARK. . . . . . . . . . . . LKAVEAA
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Template Sequence  PACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCG
Template Known Secondary structure  TTTTTTTS

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   21........30.........40.........50.........60.........70.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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