Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5E6
Confidence98.65%DateWed Jul 10 14:22:42 BST 2013
Rank21Aligned Residues83
% Identity11%Templatec4f6nA_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:transcriptional regulator kaiso; PDBTitle: crystal structure of kaiso zinc finger dna binding protein in complex2 with methylated cpg site dna
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   222.......230.........240.........250.........260.........270.........280.
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Query Sequence  RGEKGRLYCPTCKVTVNSASQLQAHNTGAKHRWMVEGHQGAPRRGRGRPVSRGGTGHKTK
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Template Sequence  VDGRVYYICIVCKRSYVCLTSLRRHFN. . . . . . . . . . . . . IHSWEKKYPCRYCEKVFPLA
Template Known Secondary structure  TTTTT

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   488.490.........500.........510.... .....520.........530....
 
   282.......290.........300.........310.......
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Query Sequence  RVIGNRGGRQGPSPPFHCALCQLHVNSETQLKQHMS
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Template Sequence  EYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIK
Template Known Secondary structure  T


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   535....540.........550.........560.........570
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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