Job Description A2A5E6 Confidence 98.47% Date Wed Jul 10 14:22:42 BST 2013
Rank 33 Aligned Residues 86
% Identity 12% Template c2ej4A_
PDB info
PDB header: gene regulationChain: A: PDB Molecule: zinc finger protein zic 3;
PDBTitle: functional and structural basis of nuclear localization2 signal in zic3 zinc finger domain: a role of conserved3 tryptophan residue in the zinc finger domain
Resolution UNK
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
204 . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
P G P E P A E G A V G S G V N G E G R G E K G R L Y C P T C K V T V N S A S Q L Q A H N T G A K H R W M V E G H Q G A P
Query Conservation  
                                                                                                       
Alig confidence  
. . . . . . . . . .
Template Conservation  
                                                                      . . . . . . . . . .        
Template Sequence  
S S G S S G Q P I K Q E L S C K W I D E A Q L S R P K K S C D R T F S T M H E L V T H V T .
.
.
.
.
.
.
.
.
.
M E H V G
Template Known Secondary structure  
S S S S S S S S . . . . . . . . . . T T T
Template Predicted Secondary structure  
. . . . . . . . . .
Template SS confidence  
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . .
. . . 50 .
 
   
264 . . . .
. 270 . . . . . . . . . 280 . . . . . . . . . 290 . . . . . . . . .
Predicted Secondary structure  
. . . . . .
Query SS confidence  
.
.
.
.
.
.
Query Sequence  
R R G R G .
.
.
.
.
.
R P V S R G G T G H K T K R V I G N R G G R Q G P S P P F H C
Query Conservation  
          . . . . . .                                                            
Alig confidence  
. . . . . .
Template Conservation  
                                                   
Template Sequence  
G P E Q N N H V C Y W E E C P R E G K S F K A K Y K L V N H I R V H T G E K S G P S
Template Known Secondary structure  
T T S T T S S T T S S T S S
Template Predicted Secondary structure  
Template SS confidence  
   
52 . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
 
Phyre2 is part of Genome3D