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Job Description | A2A5E6 | Confidence | 98.15% | Date | Wed Jul 10 14:22:42 BST 2013 |
Rank | 44 | Aligned Residues | 90 |
% Identity | 13% | Template | c1ubdC_ |
PDB info |
PDB header:transcription/dna | Chain: C: PDB Molecule:protein (yy1 zinc finger domain); |
PDBTitle: co-crystal structure of human yy1 zinc finger domain bound2 to the adeno-associated virus p5 initiator element
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Resolution | 2.50 Å |
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230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
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. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | P | T | C | K | V | T | V | N | S | A | S | Q | L | Q | A | H | N | T | G | A | K | H | R | W | M | . |
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V | E | G | H | Q | G | A | P | R | R | G | R | G | R | P | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | K | G | C | T | K | M | F | R | D | N | S | A | M | R | K | H | L | H | T | H | G | P | R | V | H | V | C | A | E | C | G | K | A | F | V | E | S | S | K | L | K | R | H | Q | L | V | H | T | G | E | K | P | F | Q | C | T | F | E | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . |
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272 | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | R | G | G | T | G | H | K | T | K | R | V | I | G | N | R | G | G | R | Q | G | P | S | P | P | F | H | C | A | L | C | Q | L | H | V | N | S | E | T | Q | L | K | Q | H | M | S | S | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
C | G | K | R | F | S | L | D | F | N | L | R | T | H | V | R | I | H | T | G | D | R | P | Y | V | C | P | F | D | G | C | N | K | K | F | A | Q | S | T | N | L | K | S | H | I | L | T | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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