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Job DescriptionA2A5E6
Confidence32.57%DateWed Jul 10 14:22:42 BST 2013
Rank230Aligned Residues62
% Identity10%Templatec3hcsA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tnf receptor-associated factor 6; PDBTitle: crystal structure of the n-terminal domain of traf6
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   255....260.........270.........280.........290.........300.........310....
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Query Sequence  MVEGHQGAPRRGRGRPVSRGGTGHKTKRVIGNRGGRQGPSPPFHCALCQLHVNSETQLKQ
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Template Sequence  LRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMA. FEDKEI
Template Known Secondary structure  GGGTT
TTS
TTT

GGGT
TT

TTT

.GGG
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   145....150.........160.........170.........180.........190....... ..200...
 
   315..
Predicted Secondary structure 
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Query Sequence  HMS
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Template Conservation 
  
Template Sequence  HDQ
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   204..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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