Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5E6
Confidence98.47%DateWed Jul 10 14:22:42 BST 2013
Rank32Aligned Residues82
% Identity18%Templatec1tf3A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:transcription factor iiia; PDBTitle: tfiiia finger 1-3 bound to dna, nmr, 22 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.. .......240.........250.........260.........270.........280...
Predicted Secondary structure 






..







































Query SS confidence 






. .


















































Query Sequence  GRLYCPT. . CKVTVNSASQLQAHNTGAKHRWMVEGHQGAPRRGRGRPVSRGGTGHKTKRV
Query Conservation      
  ..
     
   
  
  
 

                               
Alig confidence 






..















...........























Template Conservation 
 
 
    
 
 
     
  
  ........... 
            
         
Template Sequence  KRYICSFADCGAAYNKNWKLQAHLS. . . . . . . . . . . KHTGEKPFPCKEEGCEKGFTSLHH
Template Known Secondary structure 


SSGGG

SS...........


S


SS


SSTT
Template Predicted Secondary structure 












...........

















Template SS confidence 



























































   11........20.........30..... ....40.........50.........
 
   284.....290.........300. ........310........
Predicted Secondary structure 













..








Query SS confidence 

















. .
















Query Sequence  IGNRGGRQGPSPPFHCAL. . CQLHVNSETQLKQHMSS
Query Conservation                 
  ..
         
  
   
Alig confidence 

















..
















Template Conservation                 
 
  
 
 
     
  
   
Template Sequence  LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR
Template Known Secondary structure  T



SSSS


SS
Template Predicted Secondary structure 














Template SS confidence 




































   60.........70.........80.........90......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D