Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5E6
Confidence31.37%DateWed Jul 10 14:22:42 BST 2013
Rank232Aligned Residues36
% Identity19%Templatec2wjyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80...... ...90.........100.... .....110.
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Query Sequence  FISCNICHLRF. . . . . . NSANQAEAHYKGHRHARK. . . . . . . . . . . . LKAVEAA
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Template Sequence  VVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCG
Template Known Secondary structure  TTTTS

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   134.....140.........150.........160.........170.........180.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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