Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank51Aligned Residues139
% Identity15%Templatec3o2uB_
PDB info PDB header:ligaseChain: B: PDB Molecule:nedd8-conjugating enzyme ubc12; PDBTitle: s. cerevisiae ubc12
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.... .....30.........40.........50......
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Query Sequence  MKELQDIARLSDRFISVELVNENL. . . . FDWNVKLHQVDKDSVLWQDMKETNTEFILLNL
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Template Sequence  KRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVR. PDEGYYNYGS. . . . . . . INFNL
Template Known Secondary structure  T



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TTS


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   1033......1040.........1050.........1060......... 1070......... 1080....
 
   57..60.........70.........80.........90.........100.........110......
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Query Sequence  TFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVK
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Template Sequence  DFNEVYPIEPPKVVCLKKIF. HPNIDLKGNVCLNILRED. WSPALDLQSIITGLLFLFLE
Template Known Secondary structure 

TTTTTS


S


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TTB
TT
BB

GGGTTT.

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   1085....1090.........1100.... .....1110.........1120.. .......1130.........1140..
 
   117..120.........130.........140.........150..
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Query Sequence  GQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYG
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Template Sequence  PNP. . . NDPLNKDAAKLLCEGEKEFAEAVRLTMSGG
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BT
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   1143.. ....1150.........1160.........1170.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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