|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | E | L | Q | D | I | A | R | L | S | D | R | F | I | S | V | E | L | . |
. |
. |
. |
. |
V | N | E | N | L | F | D | W | N | V | K | L | H | Q | V | D | K | D | S | V | L | W | Q | D | M | K | E | T | N | T | E | F | I | L | L | N |
Query Conservation |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
| . |
|   |   |
|   |
|   |
|
|   | . | . | . | . | . | . | . |
|   |   |   |
Template Sequence |   |
Q | E | E | R | K | K | W | R | K | D | H | P | F | G | F | Y | A | K | P | V | K | K | A | D | G | S | M | D | L | Q | K | W | E | A | G | I | P | G | . |
K | E | G | T | N | W | A | G | G | V | . |
. |
. |
. |
. |
. |
. |
Y | P | I | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S |
|
| T | T |
|  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |
| . |
| T | T | S | T | T | T | T |
|  | . | . | . | . | . | . | . |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
. | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 60 | . |
  |
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | F | P | D | N | F | P | F | S | P | P | F | M | R | V | L | S | P | R | L | E | N | G | Y | V | L | D | G | G | A | I | C | M | E | L | L | T | P | . |
R | G | W | S | S | A | Y | T | V | E | A | V | M | R | Q | F | A | A | S | L |
Query Conservation |   |
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|   |   | . |   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|   |
|   |
|   | . |
|
|
|
|   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
Template Sequence |   |
V | E | Y | P | N | E | Y | P | S | K | P | P | K | V | K | F | P | A | G | F | Y | . |
H | P | N | V | Y | P | S | G | T | I | C | L | S | I | L | N | E | D | Q | D | W | R | P | A | I | T | L | K | Q | I | V | L | G | V | Q | D | L | L |
Template Known Secondary structure |   |
 |  |
|
| T | T | T | T | S | S |
|
|  |  |  |
|
| T | T |
|
| . |
| T | T | B |
| T | T | S | B | B |
|
| G | G | G |
| T | T | T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
  |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | G | Q | G | R | I | C | R | K | A | G | K | S | K | K | S | F | S | R | K | E | A | E | A | T | F | K | S | L | V | K | T | H | E | K | Y | G | W |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   | . | . | . |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
D | S | P | N | P | . |
. |
. |
N | S | P | A | Q | E | P | A | W | R | S | F | S | R | N | K | A | E | Y | D | K | K | V | L | L | Q | A | K | Q | Y | S |
Template Known Secondary structure |   |
T | S |
|
| T | . | . | . | T |
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
121 | . | . | . | . | |
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |