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Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank19Aligned Residues141
% Identity14%Templatec2ekeB_
PDB info PDB header:ligase/protein bindingChain: B: PDB Molecule:sumo-conjugating enzyme ubc9; PDBTitle: structure of a sumo-binding-motif mimic bound to smt3p-2 ubc9p: conservation of a noncovalent ubiquitin-like3 protein-e2 complex as a platform for selective4 interactions within a sumo pathway
Resolution1.90 Å
Model Dimensions (Å)X:42.270 Y:46.871 Z:32.624

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKELQDIARLSDRFISVEL. . . . . VNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLN
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Template Sequence  QEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPG. KEGTNWAGGV. . . . . . . YPIT
Template Known Secondary structure  S

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   56...60.........70.........80.........90.... .....100.........110....
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Query Sequence  LTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTP. RGWSSAYTVEAVMRQFAASL
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Template Sequence  VEYPNEYPSKPPKVKFPAGFY. HPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLL
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TTTTSS



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TTB
TTSBB

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   62.......70.........80.. .......90.........100.........110.........120
 
   115....120.........130.........140.........150...
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Query Sequence  VKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGW
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Template Sequence  DSPNP. . . NSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS
Template Known Secondary structure  TS

T...T




T
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   121.... ....130.........140.........150......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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