Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank13Aligned Residues140
% Identity21%Templatec3bzhA_
PDB info PDB header:ligaseChain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 e1; PDBTitle: crystal structure of human ubiquitin-conjugating enzyme e2 e1
Resolution1.60 Å
Model Dimensions (Å)X:65.843 Y:50.950 Z:55.509

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MKELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPD
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Template Sequence  QKELADITLDPPPNCSAGPKGDNIYEWRSTILG. PPGSVYEGGV. . . . . . . FFLDITFTP
Template Known Secondary structure  S

TTSSS
TT
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TTSTTTT
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   53......60.........70.........80..... ....90..... ....100....
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  NFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGR
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Template Sequence  EYPFKPPKVTFRTRIY. HCNINSQGVICLDILKDN. WSPALTISKVLLSICSLLTDCNP.
Template Known Secondary structure  TTTTS

SS


.BTTB
TT
BB

GGGTTT.

TT

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   105....110.........120 .........130........ .140.........150.........160.
 
   121........130.........140.........150...
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Query Sequence  ICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGW
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Template Sequence  . . ADPLVGSIATQYMTNRAEHDRMARQWTKRYA
Template Known Secondary structure  ..TS
S


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   162.......170.........180.........190..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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