Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank7Aligned Residues140
% Identity21%Templated2aaka_
SCOP infoUBC-like UBC-like UBC-related
Resolution2.40
Model Dimensions (Å)X:44.626 Y:50.130 Z:32.239

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  KELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN
Query Conservation 


  
         
     

  
   
 
  
 
    
        
 
 
 

  
Alig confidence 































.









.......









Template Conservation   
   
       
           
   
 
.
  
 
 

 .......
   
  
  
Template Sequence  RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFG. PDDTPWDGGT. . . . . . . FKLSLQFSED
Template Known Secondary structure  S

TTTT
.
TTSTTTT
.......

TT
Template Predicted Secondary structure 










.








.......


Template SS confidence 



























































   11........20.........30.........40.. .......50.. .......60..
 
   62.......70.........80.........90.........100.........110.........120.
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGRI
Query Conservation 

  

 
 
 
       
   
 


  
    


  

  

  
 


    
  
Alig confidence 














.

















.






















..
Template Conservation 

  

 
 
 
 
 .



   
 

   
   .
        

  
   
  
  ..
Template Sequence  YPNKPPTVRFVSRMF. HPNIYADGSICLDILQNQ. WSPIYDVAAILTSIQSLLCDPNP. .
Template Known Secondary structure  TTTS

SS


.
TTB
TTSBB

GGGTTS.

TT

TS

T..
Template Predicted Secondary structure 








.











.











..
Template SS confidence 



























































   63......70....... ..80.........90..... ....100.........110........
 
   122.......130.........140.........150....
Predicted Secondary structure 







Query SS confidence 
































Query Sequence  CRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWV
Query Conservation                   


   

      
 
Alig confidence  .































Template Conservation  .  
 
 


         
   
     
   
Template Sequence  . NSPANSEAARMYSESKREYNRRVRDVVEQSWT
Template Known Secondary structure  .TS
SS


Template Predicted Secondary structure  .





Template SS confidence 
































   119120.........130.........140.........150
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D