Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank43Aligned Residues141
% Identity18%Templatec3rczB_
PDB info PDB header:protein binding/ligaseChain: B: PDB Molecule:sumo-conjugating enzyme ubc9; PDBTitle: rad60 sld2 ubc9 complex
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.. .......30.........40.........50.....
Predicted Secondary structure 









.....

















Query SS confidence 





















. . . . .
































Query Sequence  MKELQDIARLSDRFISVELVNE. . . . . NLFDWNVKLHQVDKDSVLWQDMKETNTEFILLN
Query Conservation 



  
         
     .....

  
   
 
  
 
    
        
 
 
Alig confidence 





















.....










.









.......



Template Conservation    

  
                    
   
   
 
.
  
 
 

 .......
   
Template Sequence  QEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPG. KPKTSWEGGL. . . . . . . YKLT
Template Known Secondary structure  S

TT

TTSS
.
TTSTTTT
.......
Template Predicted Secondary structure 












.








.......
Template SS confidence 



























































   10.........20.........30.........40....... ..50....... ..60.
 
   56...60.........70.........80.........90... ......100.........110....
Predicted Secondary structure 




















.








Query SS confidence 





































.




















Query Sequence  LTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLT. PRGWSSAYTVEAVMRQFAASL
Query Conservation 
 

  

  

 
 
 
       
   
 


  
 .   


  

  

  
 


Alig confidence 




















.















.




















Template Conservation 
  
  

  

 
 
 
 
 .



   
 

   
     
 
   
  

  
  

Template Sequence  MAFPEEYPTRPPKCRFTPPLF. HPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLL
Template Known Secondary structure 

TTTTTS

SS


.STTB
TTSBB

GGG
TTTT

TT

Template Predicted Secondary structure 











.
























Template SS confidence 



























































   62.......70.........80.. .......90.........100.........110.........120
 
   115....120.........130.........140.........150...
Predicted Secondary structure 













Query SS confidence 






































Query Sequence  VKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGW
Query Conservation      
                   


   

      
Alig confidence 




...






























Template Conservation    
  ...    
  

         
   

    
 
Template Sequence  DDPNI. . . ASPAQTEAYTMFKKDKVEYEKRVRAQARENA
Template Known Secondary structure  TS

T...TS
S

T
Template Predicted Secondary structure 




...



Template SS confidence 






































   121.... ....130.........140.........150......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D