Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence22.51%DateWed Jul 10 14:10:37 BST 2013
Rank78Aligned Residues89
% Identity12%Templatec3ca8B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:protein ydcf; PDBTitle: crystal structure of escherichia coli ydcf, an s-adenosyl-l-methionine2 utilizing enzyme
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70... ......80.........90.........100.........110......
Predicted Secondary structure 








.






















Query SS confidence 















.










































Query Sequence  FPDNFPFSPPFMRVLS. PRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVK
Query Conservation 

  

  

 
 
 
.       
   
 


  
    


  

  

  
 


  
Alig confidence 















.










































Template Conservation 
     
          
   
                  
     
    

  

 
 
Template Sequence  FRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDD
Template Known Secondary structure 

BTTB
S

SS


TTSS

SS


S
S
Template Predicted Secondary structure 


































Template SS confidence 



























































   163......170.........180.........190.........200.........210.........220..
 
   117..120.........130.........140......
Predicted Secondary structure 









Query SS confidence 





























Query Sequence  GQGRICRKAGKSKKSFSRKEAEATFKSLVK
Query Conservation    
                   


   

Alig confidence 





























Template Conservation    



 
 

     

  
  
   
  
Template Sequence  SDGYGPRGRDFIVHVDFPAEVIHAWQTLKH
Template Known Secondary structure  TTSSSTTTT
SS





T
Template Predicted Secondary structure 














Template SS confidence 





























   223......230.........240.........250..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D