Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank54Aligned Residues135
% Identity17%Templatec2ob4A_
PDB info PDB header:ligaseChain: A: PDB Molecule:ubiquitin-conjugating enzyme e2-32 kda complementing; PDBTitle: human ubiquitin-conjugating enzyme cdc34
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10......... 20.........30.........40.........50.........
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Query Sequence  MKELQDIARLSDRFISVEL. VNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFP
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Template Sequence  LLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFG. PPNTYYEGGY. . . . . . . FKARLKFP
Template Known Secondary structure  S

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   14.....20.........30.........40....... ..50....... ..60.....
 
   60.........70.........80.........90.........100.........110.........
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Query Sequence  DNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQG
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Template Sequence  IDYPYSPPAFRFLTKMW. HPNIYETGDVCISIL. . . . HPPVQNVRTILLSVISLLNEPNT
Template Known Secondary structure  TTTTSS

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   66...70.........80.. .......90....... ..100.........110.........120
 
   120.........130.........140. ........150.
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Query Sequence  RICRKAGKSKKSFSRKEAEATF. . . KSLVKTHEKY
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Template Sequence  . . . FSPANVDASVMYRKWKESKGKDREYTDIIRKQ
Template Known Secondary structure  ...SS
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   137..140.........150.........160........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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