Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank47Aligned Residues139
% Identity17%Templated1c4zd_
SCOP infoUBC-like UBC-like UBC-related
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  MKELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPD
Query Conservation 



  
         
     

  
   
 
  
 
    
        
 
 
 

 
Alig confidence 
































.









.......








Template Conservation    
   
                       
  .
  
 
 

 .......
   
 

 
Template Sequence  MKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV. PDNPPYDKGA. . . . . . . FRIEINFPA
Template Known Secondary structure  TT
SSS

SS

SS
SSSS
.

SSS

S

.......

T
Template Predicted Secondary structure 











.








.......

Template SS confidence 



























































   8.10.........20.........30.........40 .........50 .........
 
   61........70.........80.........90.........100.........110.........120
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  NFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGR
Query Conservation   

  

 
 
 
       
   
 


  
    


  

  

  
 


    
 
Alig confidence 












.












































.
Template Conservation   

  

 
 
 
. 
 



   
 


  
    
 
   
  

  
   
  
  .
Template Sequence  EYPFKPPKITFKT. KIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQP.
Template Known Secondary structure  TTTTS

SS.



TTB
TT
BB

TTTSSSS

TT

S


.
Template Predicted Secondary structure 







.

























.
Template SS confidence 



























































   60.........70.. .......80.........90.........100.........110.......
 
   121........130.........140.........150.
Predicted Secondary structure 





Query SS confidence 






























Query Sequence  ICRKAGKSKKSFSRKEAEATFKSLVKTHEKY
Query Conservation                    


   

     
Alig confidence  ..




























Template Conservation  ..    
  

         
   
     
Template Sequence  . . EHPLRADLAEEYSKDRKKFCKNAEEFTKK
Template Known Secondary structure  ..SS
S
T
SSTTTT
Template Predicted Secondary structure  ..



Template SS confidence 






























   118.120.........130.........140......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D