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Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank12Aligned Residues142
% Identity20%Templatec4gprA_
PDB info PDB header:ligaseChain: A: PDB Molecule:ubiquitin-conjugating enzyme family protein; PDBTitle: crystal structure of ehubc5, a ubiquitin conjugating enzyme from2 entamoeba histolytica
Resolution1.60 Å
Model Dimensions (Å)X:38.150 Y:53.471 Z:32.299

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MKELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPD
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Template Sequence  QKELREIQQDPPCNCSAGPVGDDIFHWTATITG. PDDSPYQGGL. . . . . . . FFLDVHFPV
Template Known Secondary structure  S

TTSSS
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   7..10.........20.........30......... 40......... 50........
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  NFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGR
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Template Sequence  DYPFKAPRVTFMTKVY. HPNINKNGVICLDIL. KDQWSPALTLSRVLLSISSLLTDPNP.
Template Known Secondary structure  TTTSS

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   5960.........70.... .....80......... 90.........100.........110.....
 
   121........130.........140.........150......
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Query Sequence  ICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTP
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Template Sequence  . . SDPLDPEVANVLRANKKQFEDTAREWTRM. YARP
Template Known Secondary structure  ..TS
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   116...120.........130.........140.... ....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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