Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank34Aligned Residues140
% Identity24%Templatec3e95A_
PDB info PDB header:ligaseChain: A: PDB Molecule:ubiquitin carrier protein; PDBTitle: crystal structure of the plasmodium falciparum ubiquitin2 conjugating enzyme complex, pfubc13-pfuev1a
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  KELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDN
Query Conservation 


  
         
     

  
   
 
  
 
    
        
 
 
 

  
Alig confidence 































.









.......









Template Conservation   
   
       
       
   
   
 
.
  
 
 

 .......
   
  
  
Template Sequence  KETQNLANEPPPGIMAVPVPENYRHFNILING. PDGTPYEGGT. . . . . . . YKLELFLPEQ
Template Known Secondary structure  S

TTTT
.
TTSTTTT
.......

TT
Template Predicted Secondary structure 










.








.......


Template SS confidence 



























































   8.10.........20.........30......... 40......... 50.........
 
   62.......70.........80.........90.........100.........110.........120.
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  FPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGRI
Query Conservation 

  

 
 
 
       
   
 


  
    


  

  

  
 


    
  
Alig confidence 














.














..
























..
Template Conservation 

  

 
 
 
 
 .



   
 


  
..  
 
   
  

  
   
  
  ..
Template Sequence  YPMEPPKVRFLTKIY. HPNIDKLGRICLDIL. . DKWSPALQIRTVLLSIQALLSSPEP. .
Template Known Secondary structure  TTSS

SS


.
TTB
TTSBB

TT
..



TTS
S

T..
Template Predicted Secondary structure 









.










..












..
Template SS confidence 



























































   60.........70.... .....80......... 90.........100.........110....
 
   122.......130.........140.........150.....
Predicted Secondary structure 








Query SS confidence 

































Query Sequence  CRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVT
Query Conservation                   


   

      
  
Alig confidence  .
































Template Conservation  .    
  

         
    
    
 
  
Template Sequence  . DDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN
Template Known Secondary structure  .TS
SS
SS
Template Predicted Secondary structure  .







Template SS confidence 

































   116...120.........130.........140........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D