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Job DescriptionA0PJN4
Confidence100.00%DateWed Jul 10 14:10:37 BST 2013
Rank20Aligned Residues139
% Identity23%Templatec1i7kB_
PDB info PDB header:ligaseChain: B: PDB Molecule:ubiquitin-conjugating enzyme e2 h10; PDBTitle: crystal structure of human mitotic-specific ubiquitin-2 conjugating enzyme, ubch10
Resolution1.95 Å
Model Dimensions (Å)X:47.003 Y:44.519 Z:34.886

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MKELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPD
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Template Sequence  QQELMTLMMSGDKGISAFPESDNLFKWVGTIHG. AAGTVYEDLR. . . . . . . YKLSLEFPS
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   36...40.........50.........60........ .70........ .80.......
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  NFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGR
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Template Sequence  GYPYNAPTVKFLTPCY. HPNVDTQGNISLDILKEK. WSALYDVRTILLSIQSLLGEPNI.
Template Known Secondary structure  TTTSS

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TTB
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GGGTTT.

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   88.90.........100... ......110.........120. ........130.........140....
 
   121........130.........140.........150...
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Query Sequence  ICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGW
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Template Sequence  . . DSPLNTHAAELWK. NPTAFKKYLQETYSKQV
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   145....150....... ..160.........170....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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