Return to main results Retrieve Phyre Job Id

Job DescriptionA2A3V2
Confidence100.00%DateWed Jul 10 14:16:38 BST 2013
Rank2Aligned Residues271
% Identity23%Templatec2lckA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:mitochondrial uncoupling protein 2; PDBTitle: structure of the mitochondrial uncoupling protein 2 determined by nmr2 molecular fragment replacement
ResolutionUNK
Model Dimensions (Å)X:57.804 Y:65.568 Z:48.886

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40... ......50.........60.....
Predicted Secondary structure 


.........









Query SS confidence 




























. . . . . . . . .





















Query Sequence  RLLCAGLAGAFSLSLTAPLELATVLAQVG. . . . . . . . . KVQSHSLGLWATGRRVWLSEGP
Query Conservation    


  

 
   
  


 



 
  .........       
       
   

 
Alig confidence 




























.........





















Template Conservation    


  
      
  


 



 
                          
    
 
Template Sequence  KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGP
Template Known Secondary structure  TTSS

TT

S
S
SS
S

Template Predicted Secondary structure 






















Template SS confidence 



























































   16...20.........30.........40.........50.........60.........70.....
 
   66...70.........80.........90.........100.........110.........120.....
Predicted Secondary structure 












Query SS confidence 



























































Query Sequence  RALWKGNGVACLRLFPCSMVQLAAYRKFVVLFMDDLGRISQWSSIVTGSLAGMVSTIVTY
Query Conservation   




    

       
 
  
                      
  
         
Alig confidence 



























































Template Conservation       
                                                      
Template Sequence  RSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQ
Template Known Secondary structure  SSTTTS


SS

S
Template Predicted Secondary structure 




















Template SS confidence 



























































   76...80.........90.........100.........110.........120.........130.....
 
   126...130.........140. ........150.........160.........170.........180...
Predicted Secondary structure 


..











Query SS confidence 















. .









































Query Sequence  PTDLIKTRLMVQNVLE. . PSYRGLIHAFSTIYQQEGFLALYRGVSLTVLGAVPFSAGSLL
Query Conservation 
      
        ..                 
   

 
    
            
Alig confidence 















..









































Template Conservation                                     
      
                 
Template Sequence  PTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELV
Template Known Secondary structure  S
S


SSS



Template Predicted Secondary structure 































Template SS confidence 



























































   136...140.........150.........160.........170.........180.........190.....
 
   184.....190.... .....200.........210.........220.........230.........240..
Predicted Secondary structure 
.


















Query SS confidence 










.















































Query Sequence  VYMNLEKVWNG. PRDRFSHLQNFANVCVAAAVSQTLSFPFDTVKRKMQAQSPYLPHYGGV
Query Conservation   
   
     .                
   
   
 









            
Alig confidence 










.






































.........
Template Conservation                              
         
        
   .........
Template Sequence  TYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA. . . . . . . . .
Template Known Secondary structure  TTTTTTS

S
TT

.........
Template Predicted Secondary structure 













.........
Template SS confidence 



























































   196...200.........210.........220.........230.........240......
 
   243......250.........260.........270.........280.........290....
Predicted Secondary structure 







Query SS confidence 



















































Query Sequence  DVHFSGAADCFRQIVKTQGVLGLWNGLTANLLKVVPYFGVMFSMFEFCKRIF
Query Conservation     
         
 
 


 




    


  
  

 
  

  
   
Alig confidence 



















































Template Conservation               
 
 

  




    
        
    

  
  
Template Sequence  LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL
Template Known Secondary structure  SSS

SSS
TS

S

Template Predicted Secondary structure 







Template SS confidence 



















































   247..250.........260.........270.........280.........290........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D