 |
Job Description | A2A6C4 | Confidence | 9.43% | Date | Wed Jul 10 14:09:18 BST 2013 |
Rank | 52 | Aligned Residues | 35 |
% Identity | 34% | Template | d2dk8a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| RPO3F domain-like
|
Resolution | UNK |
|
  |   |
629 | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | S | G | S | P | M | A | L | E | A | M | L | I | P | L | I | Q | P | I | P | H | . |
. |
. |
. |
. |
. |
. |
P | S | E | L | G | H | I | R | T | Q | S | R | V | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |
|
|
|   |
|   |   |   |
|   |
|
|
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |
Template Sequence |   |
P | D | A | D | P | V | E | I | E | N | R | I | I | E | L | C | H | Q | F | P | H | G | I | T | D | Q | V | I | Q | N | E | M | P | H | I | E | A | Q | Q | R | A | V |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|