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Job DescriptionA2A6C4
Confidence11.47%DateWed Jul 10 14:09:18 BST 2013
Rank36Aligned Residues91
% Identity21%Templatec2ovsB_
PDB info PDB header:gene regulation, ligand binding proteinChain: B: PDB Molecule:l0044; PDBTitle: crystal strcuture of a type three secretion system protein
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.. .......110.........120.........130.........140
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Query Sequence  AQDSSPRQRPLHQTTTMV. . . . TRGNCSFYAKGWLAQDQGAQGLLIVSRARNQQCSDTIS
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Template Sequence  IIFISNEDSCGEGILIKNGNXITGGDIASVYQGVLSEDED. . IILHVHRYNYEIP. . . . .
Template Known Secondary structure  TTS
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   10.........20.........30.........40......... 50.........60..
 
   141........150.........160.........170.........180...
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Query Sequence  KPQDPSKPWPALTIPVAVLRYTDMLDIVSHTYGDTDVRVAMFA
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Template Sequence  SVLNIEQDY. QLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYA
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   63......70. ........80.........90.........100....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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