 |
Job Description | A2A6C4 | Confidence | 7.47% | Date | Wed Jul 10 14:09:18 BST 2013 |
Rank | 93 | Aligned Residues | 45 |
% Identity | 18% | Template | c3cz6A_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:dna-binding protein rap1; |
PDBTitle: crystal structure of the rap1 c-terminus
|
Resolution | 1.85 Å |
|
  |   |
611 | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | S | E | S | S | E | G | W | S | D | T | N | L | D | P | N | E | L | P | S | G | S | P | M | A | L | E | A | M | L | I | P | L | I | Q | P | I | P | H | P | S | E | L | G | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |
Template Sequence |   |
R | S | D | F | S | N | E | D | I | Y | D | N | I | D | P | D | T | I | S | F | P | P | K | I | A | T | T | D | L | F | L | P | L | F | F | H | F | G | S | T | R | Q | F | X | D |
Template Known Secondary structure |   |
|
| S |
|
| G | G | G | G | G | T |
|
|
| G | G | G | S |
| S | S |
| T | T |
|
| T | T | T | B |
| G | G | G | G | G |
| S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
674 | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|