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Job DescriptionA2A6C4
Confidence96.17%DateWed Jul 10 14:09:18 BST 2013
Rank11Aligned Residues84
% Identity19%Templatec3iibA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:peptidase m28; PDBTitle: crystal structure of peptidase m28 precursor (yp_926796.1) from2 shewanella amazonensis sb2b at 1.70 a resolution
Resolution1.70 Å
Model Dimensions (Å)X:37.555 Y:39.243 Z:25.961

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100........ .110.........120.........130.........140.
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Query Sequence  LHQTTTMVTRGNCS. . . . . . . . . . . . . FYAKGWLAQDQGAQGLLIVSRARNQQCSDTISK
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Template Sequence  LNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGT. . . DHDRXAH
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   150.........160.........170.........180.........190......... 200......
 
   142.......150.........160.........170.........180.
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Query Sequence  PQDPSKPWPALTIPVAVLRYTDMLDIVSHTYGDTDVRVAM
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Template Sequence  TGXXRYEEGVTAIPAAAISNPDADLINAXLKRDKEVVISL
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   207..210.........220.........230.........240......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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