Return to main results Retrieve Phyre Job Id

Job DescriptionA2A6C4
Confidence99.43%DateWed Jul 10 14:09:18 BST 2013
Rank1Aligned Residues130
% Identity16%Templatec3icuA_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf128; PDBTitle: protease-associated domain of the e3 ligase grail
Resolution2.10 Å
Model Dimensions (Å)X:49.822 Y:41.443 Z:39.294

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........
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Query Sequence  WSKDYCVLYSSDYVNLPRDLHHAPLLSLHDGTKTPWCPDEDSFHQAQDSSPRQRPLHQTT
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Template Sequence  WELSEEGVYGQ. . . DSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGST. . VQVSWL
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T...TS

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BSSTT
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   63......70... ......80.........90.........100.........110. ......
 
   100.... .....110.........120.........130.........140.........150........
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Query Sequence  TMVTR. GNCSFYAKGWLAQDQGAQGLLIVSRARNQQCSDTISKPQDPSKPWPALTIPVAV
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Template Sequence  ALIQRGGGCTFADKIHLAYERGASGAVIFNF. . PGTRNEVIPMSHPGAV. . . . . DIVAIM
Template Known Secondary structure  S
TT

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   118.120.........130.........140........ .150.........160.... .....170
 
   159160.........170.........180.
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Query Sequence  LRYTDMLDIVSHTYGDTDVRVAM
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Template Sequence  IGNLKGTKILQSIQRGIQVTMVI
Template Known Secondary structure 
TT

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   171........180.........190...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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