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Job DescriptionA2A5R2
Confidence94.63%DateWed Jul 10 14:14:35 BST 2013
Rank22Aligned Residues204
% Identity9%Templatec2db0B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:253aa long hypothetical protein; PDBTitle: crystal structure of ph0542
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1143......1150.........1160.........1170.........1180.........1190.........1200..
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Query Sequence  HVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNR
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Template Sequence  ESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYE. . . . . . . . PMLKKLFSLLKKSE
Template Known Secondary structure  TT
SSGGG
GGG........

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   31........40.........50.........60........ .70.........80..
 
   1203......1210.........1220.........1230.........1240.........1250.........1260..
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Query Sequence  SPTIRDMVIRCIAQMVSSQAANIRSGWKNIFAVFHQAASDHDGNIVELAFQTTGHIVSTI
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Template Sequence  AIPLTQEIAKAFGQMAKEKPELV. . . . KSMIPVLFANYRIGDEKTKINVSYALEEIAKA.
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....TTT



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   83......90.........100..... ....110.........120.........130.......
 
   1263......1270.........1280.........1290.........1300.........1310.........1320..
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Query Sequence  FQHHFPAAIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTSDD
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Template Sequence  . . . . . . . NPMLMASIVRDFMSMLS. SKNREDKLTALNFIEAMGENSFKYVNPFLPRIINL
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GGGG.
SSTT

TTTGGGGG
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   138.140.........150.... .....160.........170.........180.........
 
   1323......1330...... ...1340.........1350.........1360.......
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Query Sequence  MNVAPGDRVWVRGW. . . . . . . . . . . . FPILFELSCIINRCKLDVRTRGLTVMFEIMK
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Template Sequence  LHDGDEIVRASAVEALVHLATLNDKLRKVVIKRLEELNDTSSLVNKTVKEGISRLLL
Template Known Secondary structure  GG
S

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   190.........200.........210.........220.........230.........240......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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