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Job DescriptionA2A5R2
Confidence95.60%DateWed Jul 10 14:14:35 BST 2013
Rank21Aligned Residues346
% Identity8%Templated1qbkb_
SCOP infoalpha-alpha superhelix ARM repeat Armadillo repeat
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1116...1120.........1130.........1140.........1150.........1160.........1170.....
Predicted Secondary structure 






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Query Sequence  RMFSLQKIVEISYYNMNRIRLQWSRIWHVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKF
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Template Conservation 
         
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Template Sequence  KESGILVLGAIAEGCXQGX. . . . IPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWV
Template Known Secondary structure  TTTS....TTTTTSS
T
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   414.....420.........430.. .......440.........450.........460.........
 
   1176...1180.........1190.........1200.........1210.........1220.........1230.....
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Query Sequence  LEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVIRCIAQMVSSQAANIRSGWKNIFAV
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Template Conservation            ...         
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Template Sequence  VSQPPDTYLK. . . PLXTELLKRILDS. NKRVQEAACSAFATLEEEACTELVPYLAYILDT
Template Known Secondary structure  SS
TT...TSSS.
TTSSGGG
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   470......... 480.........490.. .......500.........510.........520.....
 
   1236...1240.........1250.........1260.........1270 ...
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Query Sequence  FHQAASDHDGNIVELAFQTTGHIVSTIFQHHFPAA. . . . . . . . . . . . . . . . . . . . . . IDS
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Template Conservation 
   
              
                   
   
                
Template Sequence  LVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQXLXPPLIQKWNXLKDEDKDLFP
Template Known Secondary structure  TTT

GGGG
STTS
TT
TT
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   526...530.........540.........550.........560.........570.........580.....
 
   1274.....1280.........1290.........1300.........1310.........1320.......
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Query Sequence  FQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTSDDMNVAP. . . . . .
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Template Conservation      
                         
                             
Template Sequence  LLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAXLNNAQPDQYEAPDKDFXIVAL
Template Known Secondary structure  STTTT
TTTS



T
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   586...590.........600.........610.........620.........630.........640.....
 
   1328.1330.....
Predicted Secondary structure  ....................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GDRVWVRG
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Template Conservation    
                                          
              
Template Sequence  DLLSGLAEGLGGNIEQLVARSNILTLXYQCXQDKXPEVRQSSFALLGDLTKACFQHVKPC
Template Known Secondary structure  TTTTTS
T
SS
GGGTGGG
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   646...650.........660.........670.........680.........690.........700.....
 
   1336...1340.........1350.........1360.........1370.........1380.........1390.....
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Query Sequence  WFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQDLFRIVFRIFDNMKLP
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Template Sequence  IADFXPILGTNLNPEFISVCNNATWAIGEISIQXGIEXQPY. IPXVLHQLVEIIN. . . . .
Template Known Secondary structure  T

GGGTGGGGGGG.ST.....
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   706...710.........720.........730.........740...... ...750.........
 
   1396...1400.........1410.........1420.........1430.........1440.........1450.....
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Query Sequence  EQQSEKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQWCVKQDNEQLARSGT
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Template Conservation  ..       
       
  
                      
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Template Sequence  . . RPNTPKTLLENTAITIGRLGYVCPQEVAPXLQQFIRPWCTSLRN. . . IRDNEEKDSAF
Template Known Secondary structure  ..
TT


GGGGGGTTT...S

S
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   760.........770.........780.........790.........800... ......810....
 
   1456...1460.........1470.........1480
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Query Sequence  NCLENLVISNGEKFSPAVWDETCNC
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Template Conservation    
   
          
      
Template Sequence  RGICTXISVNPSGVIQDFIFFCDAV
Template Known Secondary structure 
GGGTGGG
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   815....820.........830.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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