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Job DescriptionA2A5R2
Confidence61.75%DateWed Jul 10 14:14:35 BST 2013
Rank52Aligned Residues346
% Identity10%Templatec3l6yE_
PDB info PDB header:cell adhesionChain: E: PDB Molecule:catenin delta-1; PDBTitle: crystal structure of p120 catenin in complex with e-cadherin
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1116...1120.........1130.........1140........ .1150.........1160.........1170
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Query Sequence  RMFSLQKIVEISYYNMNRIRLQWSRIWHVIGDH. . . . . FNKVGCNPNEDVAIFAVDSLRQ
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Template Sequence  KSNAAAYLQHLCYRN. . . . . . . . DKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKN
Template Known Secondary structure  TT
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   383......390....... ..400.........410.........420.........430....
 
   1171........1180.........1190.........1200.........1210.........1220 .......
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Query Sequence  LSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVIRCIAQMVSS. . . QAANIRS
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Template Sequence  IS. . FGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDH
Template Known Secondary structure  T..SSS
TT

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   435. ...440.........450.........460.........470.........480.........490..
 
   1228.1230.........1240 .........1250.........1260.........1270. .......
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Query Sequence  GWKNIFAVFHQAA. . . . . . . . SDHDGNIVELAFQTTGHIVSTIFQHHFPAAI. DSFQDAV
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Template Sequence  ALHALTDEVIIPHSGWEREPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDAL
Template Known Secondary structure  TT





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   493......500.........510.........520.........530.........540.........550..
 
   12791280.........1290.........1300.........1310.........1320.........1330........
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Query Sequence  KCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTSDDMNVAPGDRVWVRGWFP
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Template Sequence  IFIVQAEIGQKDSDSKLV. . . . . ENCVCLLRNLSYQVHREIPQAERYSPARGYELLFQPE
Template Known Secondary structure  TTT
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   559560.........570...... ...580.........590.........600.........610...
 
   13391340..... ....1350.........1360.........1370.........1380.........1390.......
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Query Sequence  ILFELSC. IINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQDLFRIVFRIFDNMKLPEQ
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Template Sequence  VVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEH
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STSGGG
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   658.660.........670.........680.........690.........700.........710.......
 
   1398.1400.........1410.........1420.........1430.........1440.........1450.......
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Query Sequence  QSEKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQWCVKQDNEQLARSGTNC
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Template Sequence  E. . . . . . . . RVVKAASGALRNL. AVDARNK. ELIGKHAIPNLVKNLPNFSEDTVISILNT
Template Known Secondary structure  .........GGG
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   718 .720.........730. ....... .740.........750.........760.......
 
   1458.1460. ........1470.........1480......
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Query Sequence  LENL. . . . . . . VISNGEKFSPAVWDETCNCMLDIFK
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Template Sequence  INEVIAEGIEKLVLINKSRSEKEVRAAALVLQTIWG
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   776...780.........790.........800.........810.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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