Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5R2
Confidence27.94%DateWed Jul 10 14:14:35 BST 2013
Rank84Aligned Residues62
% Identity15%Templated1l8qa1
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like Chromosomal replication initiation factor DnaA C-terminal domain IV
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   682.......690.. .......700.........710.........720.........730.........740
Predicted Secondary structure 

.


















Query SS confidence 










.















































Query Sequence  VEDIAQFLHQE. ERLDSTQVGEFLGDSTRFNKEVMYAYVDQLDFCEKEFVSALRTFLEGF
Query Conservation 
  

 

   .  


  





     
  

  

   

       


 

  
Alig confidence 










.















..


















...........
Template Conservation 

 




 
  
  

  

  

 

..



  
  


   
   ...........
Template Sequence  ARKIAXYLCRKVCSASLIEIARAFKRKD. . HTTVIHAIRSVEEEKKRKF. . . . . . . . . . .
Template Known Secondary structure 


SS


..STTT


...........
Template Predicted Secondary structure 







.............
Template SS confidence 



























































   335....340.........350.........360.. .......370.........380.
 
   741........750.........760.
Predicted Secondary structure 




Query SS confidence 




















Query Sequence  RLPGEAQKIDRLMEKFAARYI
Query Conservation 






 





 

  
 
Alig confidence  .....















Template Conservation  .....   
  
  

     
Template Sequence  . . . . . KHLVGFLEKQAFDKIC
Template Known Secondary structure  .....
Template Predicted Secondary structure  .....
Template SS confidence 




















   384.....390.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D