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Job DescriptionA2A5R2
Confidence36.91%DateWed Jul 10 14:14:35 BST 2013
Rank74Aligned Residues181
% Identity18%Templatec3u0rA_
PDB info PDB header:apoptosis inhibitorChain: A: PDB Molecule:apoptosis inhibitor 5; PDBTitle: helical repeat structure of apoptosis inhibitor 5 reveals protein-2 protein interaction modules
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1340.........1350.........1360.........1370.........1380.........1390.........
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Query Sequence  LFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQDLFRIVFRIFDNMKLPEQQS
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Template Sequence  INAQLDLCEDEDVSIRRQAIKELPQFAT. . . . . . . GENLPRVADILTQLLQ. . . . . . . . .
Template Known Secondary structure  T
SSGGGG

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   64.....70.........80.........90. ........100.......
 
   1400.........1410.........1420.........1430.........1440.........1450.........
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Query Sequence  EKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQWCVKQDNEQLARSGTNCLE
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Template Sequence  TDDSAEFNLVNNALLSIFKMDAK. . . . . . . . . . . GTLGGLFSQILQGEDIVRERAIKFLS
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   108.110.........120.........130 .........140.........150......
 
   1460 .........1470.........1480.........1490.........1500.........1510........
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Query Sequence  N. LVISNGEKFSPAVWDETCNCMLDIFKTTIPHVLLTWRPAGMEEEVSDRHLDVDLDRQS
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Template Sequence  TKLKTLPDEVLTKEVEELILTESKKVLEDVTGEEFVLFMKILS. . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGS
TTTS
TTS

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   157..160.........170.........180.........190.........
 
   15191520.........1530.........1540.........1550.........1560.........1570........
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Query Sequence  LSSIDRNASERGQSQLSNPTDDSWKGAPYAHQKLLASLLIKCVVQLELIQTIDNIVFYPA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLKSLQTVSGRQQLVELVAEQA. . . .
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   200.........210.........220.
 
   15791580.........1590.........1600.........1610.........1620........
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Query Sequence  TSKKEDAEHMVAAQQDTLDAEIHIETENQGMYKFMSSQHLFKLLDCLQES
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . DLEQTFNPSDPDCVDRLLQCTRQA
Template Known Secondary structure  ..........................TTTS


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   222.......230.........240.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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