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Job DescriptionA2A5R2
Confidence28.37%DateWed Jul 10 14:14:35 BST 2013
Rank83Aligned Residues161
% Identity12%Templatec1o1nA_
PDB info PDB header:oxygen storage/transportChain: A: PDB Molecule:hemoglobin alpha chain; PDBTitle: deoxy hemoglobin (a-glyglygly-c:v1m,l29w; b,d:v1m)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1206...1210.........1220. ........1230.........1240.... .....1250.......
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Query Sequence  IRDMVIRCIAQMVSSQ. AANIRSGWKNIFAVFHQAASDHD. . . . . . . GNIVELAFQTTGH
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Template Sequence  LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYRVLSPADKTNVKAAWGKVGA
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TTT

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GG
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   101........110.........120.........130.........140.........150.........160
 
   1258.1260.........1270.........1280.........1290.........1300.........1310.......
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Query Sequence  IVSTIFQHHFPAAIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQE
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Template Sequence  HAGEYGAEAWERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDD. . . .
Template Known Secondary structure  G
GGGGGG
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STT
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   164.....170.........180.........190.........200.........210.........
 
   1318.1320.........1330.........1340.........1350.........1360......... 1370......
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Query Sequence  YTSDDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSY. GHTFAKH
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Template Sequence  . . . . . . . . . . . . . . . MPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPA
Template Known Secondary structure  ...............TTT


T
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   220.........230.........240.........250.........260....
 
   1377..1380.....
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Query Sequence  . . . WWQDLFRIV
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Template Conservation     

 
    
Template Sequence  VHASLDKFLASV
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   265....270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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