Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5R2
Confidence88.38%DateWed Jul 10 14:14:35 BST 2013
Rank31Aligned Residues222
% Identity13%Templated1w9ca_
SCOP infoalpha-alpha superhelix ARM repeat Exportin HEAT-like repeat
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1130.........1140.........1150. ........1160.........1170.........1180.
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Query Sequence  NMNRIRLQWSRIWHVIGDHFNK. . . . . . . . VGCNPNEDVAIFAVDSLRQLSMKFLEKGEL
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Template Sequence  QLGRIYLDMLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSN.
Template Known Secondary structure 

GGG
SGGGGSTT
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   709710.........720.........730.........740.........750.........760.......
 
   1182.......1190......... 1200........ .1210.........1220.........1230.......
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Query Sequence  ANFRFQKDFLRPFEHIMK. . . KNRSPTIRD. MVIRCIAQMVSSQAANIRSGWKNIFAVFH
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Template Sequence  DPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVF
Template Known Secondary structure 
TTS
GGG

TGGGGGGG
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   768.770.........780.........790.........800.........810.........820.......
 
   1238.1240. ........1250.........1260.........1270.........1280.........1290
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Query Sequence  QAAS. . . . . . . DHDGNIVELAFQTTGHIVSTIFQHHFPAAIDSFQDAVKCLSEFACNAAF
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Template Sequence  ECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSI. IWAFKHTM
Template Known Secondary structure  SSTTT
S
TTS
.TT
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   828.830.........840.........850.........860.........870........ .880......
 
   1291........1300.........1310.........1320.........1330.........1340.........
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Query Sequence  PDTSMEAIRLIRFCGKYVSERPRVLQEYTSDDMNVAPGDRVWVRGWFPILFELSCIINR.
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Template Sequence  RNVADTGLQILFTLLQNVAQEEAAAQ. . . . . . . . . . . . . SFYQTYFCDILQHIFSVVTDT
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   887..890.........900.........910.. .......920.........930...
 
   1350.........1360......
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Query Sequence  . . . CKLDVRTRGLTVMFEIM
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Template Sequence  SHTAGLTMHASILAYMFNLV
Template Known Secondary structure  S

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   934.....940.........950...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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