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Job DescriptionA2A5R2
Confidence32.70%DateWed Jul 10 14:14:35 BST 2013
Rank78Aligned Residues103
% Identity13%Templatec3tjzB_
PDB info PDB header:protein transport/protein bindingChain: B: PDB Molecule:coatomer subunit gamma; PDBTitle: crystal structure of arf1 bound to the gamma/zeta-cop core complex
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1144.....1150.........1160.........1170.........1180.........1190.........1200...
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Query Sequence  VIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRS
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Template Sequence  IVTSSLTKDMTGKEDSYRGPAVRALCQITDSTM. . . . . . . . . . LQAIERYMKQAIVD. KV
Template Known Secondary structure  GGSS


TTT..........T
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   104.....110.........120.........130...... ...140.........150 ..
 
   1204.....1210.........1220.........1230.........1240.........1250.........1260.
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Query Sequence  PTIRDMVIRCIAQMVSSQAANIRSGWKNIFAVFHQAASDHDGNIVELAFQTTGHIVST
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Template Sequence  PSVSSSALVSSLHLLKCSFDVVK. RW. . . VNEAQEAASSDNIMVQYHALGLLYHVRKN
Template Known Secondary structure  TTT
.TT...TT
SSTT
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   153......160.........170..... .. ..180.........190.........200......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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