Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5R2
Confidence67.07%DateWed Jul 10 14:14:35 BST 2013
Rank42Aligned Residues164
% Identity16%Templatec3opbA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:swi5-dependent ho expression protein 4; PDBTitle: crystal structure of she4p
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1161........1170.........1180...... ...1190.........1200.........1210.........
Predicted Secondary structure 





.



Query SS confidence 

























.
































Query Sequence  AIFAVDSLRQLSMKFLEKGELANFRF. QKDFLRPFEHIMKKNRSPTIRDMVIRCIAQMVS
Query Conservation     


 
 

    
   

    
.
   
 

  

  
    
 
 

 

  

 
Alig confidence 














.......



.




..

























Template Conservation           


   .......        

..   
  
     
  
 
 
  
   
Template Sequence  VTYLLSIILQLLNKF. . . . . . . KYNFKEVRFL. . VKELILRISEDEVKSMMLIIFAELQS
Template Known Secondary structure  S.......


STTTT..TTTT
Template Predicted Secondary structure 


.......




..




Template SS confidence 



























































   144.....150........ .160........ .170.........180.........190....
 
   1220.........1230.........1240.........1250.........1260.........1270..... ..
Predicted Secondary structure 











..
Query SS confidence 























































. .

Query Sequence  SQAANIRSGWKNIFAVFHQAASDHDGNIVELAFQTTGHIVSTIFQHHFPAAIDSFQ. . DA
Query Conservation       
 


  

 

  

      

  

  
 

  
 
          
 ..
 
Alig confidence 






...













































..

Template Conservation       
 ...         
  
        

   
  
  


        
 
    
Template Sequence  SFQKDFD. . . KAVVDFMSSLIVEAEIDVGNDPLSIIVKTLSELYPSLTTLCSEIFLTKGL
Template Known Secondary structure  ...T
SS
TTTTSTTT
Template Predicted Secondary structure 

...



Template SS confidence 



























































   195....200. ........210.........220.........230.........240.........250.
 
   1278.1280.........1290.........1300. ........1310.........1320. ........1330
Predicted Secondary structure 




......







.






Query SS confidence 























. . . . . .



















.








Query Sequence  VKCLSEFACNAAFPDTSMEAIRLI. . . . . . RFCGKYVSERPRVLQEYTSD. DMNVAPGDR
Query Conservation 
  
  
       



 

 

......    
 
             .         
Alig confidence 























......



















.








Template Conservation                     

 








 

  
   
   
   
     
 



Template Sequence  SKLFKKRVFEEQDLQFTKELLRLLSSACIDETMRTYITENYLQLLERSLNVEDVQIYSAL
Template Known Secondary structure  SS



STTSGGG
Template Predicted Secondary structure 






Template SS confidence 



























































   252.......260.........270.........280.........290.........300.........310.
 
   1331.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  VWVRGW
Query Conservation       
Alig confidence 





Template Conservation 





Template Sequence  VLVKTW
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 





   312.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D