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Job DescriptionA2A5R2
Confidence85.43%DateWed Jul 10 14:14:35 BST 2013
Rank34Aligned Residues310
% Identity14%Templated1gw5b_
SCOP infoalpha-alpha superhelix ARM repeat Clathrin adaptor core protein
Resolution2.59

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1118.1120.........1130.........1140.........1150.........1160.........1170.......
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Query Sequence  FSLQKIVEISYYNMNRIRLQWSRIWHVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLE
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Template Sequence  LELKKLVYLYLMNYAK. . . SQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMG. . . . . . . .
Template Known Secondary structure  ...SSTTGGGTTSSS........
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   63......70........ .80.........90.........100.........110.
 
   1178.1180.........1190.........1200.........1210.........1220.........1230.......
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Query Sequence  KGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVIRCIAQMVSSQAANIRSGWKNIFAVFH
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Template Sequence  . . CIRVDKITEYLCEPLRKCLKDE. DPYVRKTAAVCVAKLHDINAQMVED. . QGFLDSLR
Template Known Secondary structure  ..T

STTSTS
S.STTSS


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   112.......120.........130... ......140.........150........ .160......
 
   1238.1240.........1250.........1260..... ....1270.........1280......
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Query Sequence  QAASDHDGNIVELAFQTTGHIVSTIFQH. HFPAAIDSFQDAVKCLSEFAC. . . . . . . . . .
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Template Sequence  DLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCL
Template Known Secondary structure  TTS
S
TTS

S
SS
S
S
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   167..170.........180.........190.........200.........210.........220......
 
   1287..1290.........1300.........1310.........1320....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . NAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTSDDMN
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Template Sequence  SNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKF. . . . . . . . . . . . . . . . . . LE
Template Known Secondary structure  TTS


STT
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SSS..................

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   227..230.........240.........250.........260...... ..
 
   1325....1330.........1340.........1350.........1360.........1370.........1380....
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Query Sequence  VAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQDLFRI
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Template Sequence  LLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQ. . . . . . . . .
Template Known Secondary structure  S

STTSSSTTS
S

STTTT.........
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   269270.........280.........290.........300.........310.........
 
   1385....1390.........1400.........1410.........1420.........1430.........1440....
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Query Sequence  VFRIFDNMKLPEQQSEKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQWCVK
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Template Sequence  . . . . . . EIKVFFVKYNDPIYVKLEKLDIMIRLAS. . . . . . . . . . QANIAQVLAELKEYAT
Template Known Secondary structure  ......
TTTT


TTS
T

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   320.........330.........340....... ..350.........360...
 
   1445....1450.........1460.........1470.........1480.........1490.
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Query Sequence  QDNEQLARSGTNCLENLVISNGEKFSPAVWDETCNCMLDIFKTTIPH
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Template Sequence  EVDVDFVRKAVRAIGRCAIKV. . . . . EQSAERCVSTLLDLIQTKVNY
Template Known Secondary structure  SS
TT
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   364.....370.........380.... .....390.........400.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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