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Job DescriptionA2A5R2
Confidence28.94%DateWed Jul 10 14:14:35 BST 2013
Rank82Aligned Residues231
% Identity16%Templatec4db8B_
PDB info PDB header:de novo proteinChain: B: PDB Molecule:armadillo-repeat protein; PDBTitle: designed armadillo-repeat protein
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1193......1200.........1210.........1220...... ...1230.........1240........
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Query Sequence  PFEHIMKKNRSPTIRDMVIRCIAQMVSSQAANIR. . . . SGWKNIFAVFHQAASDHDGNIV
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Template Sequence  PQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAG. . . ALPALVQLLSSPNEQIL
Template Known Secondary structure  TSS
TT...GGG
S
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   14.....20.........30.........40.........50... ......60.........70
 
   12491250.........1260.........1270.........1280.........1290.........1300........
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Query Sequence  ELAFQTTGHIVSTIFQHHFPAAIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYV
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Template Sequence  QEALWALSNIASGGNEQI. . . QAVIDAGALPALVQLLS. SPNEQILQEALWALSNIASGG
Template Known Secondary structure  TS
...TT
TTS.
S
TTS
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   71........80........ .90.........100..... ....110.........120......
 
   13091310.........1320.........1330.........1340.........1350.........1360........
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Query Sequence  SERPRVLQEYTSDDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKS
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Template Sequence  NEQIQAVIDAG. . . . . . . . . . . . . . . . . . . ALPALVQLLSSPNEQILQEALWALSNIASG
Template Known Secondary structure  TT...................GGG
S
TTS
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   127..130....... ..140.........150.........160.......
 
   13691370.........1380.........1390.........1400.........1410.........1420........
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Query Sequence  YGHTFAKHWWQDLFRIVFRIFDNMKLPEQQSEKSEWMTTTCNHALYAICDVFTQFYEALH
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Template Sequence  GNEQIQAVIDAGALPALVQLLS. . . . . . . . . SPNEQILQEALWALSNIASGGNEQKQAVK
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TT
GGG.........
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   168.170.........180......... 190.........200.........210........
 
   14291430.........1440.........1450.........1460.
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Query Sequence  EVLLSDVFAQLQWCVKQDNEQLARSGTNCLENL
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Template Sequence  EA. . . GALEKLEQLQSHENEKIQKEAQEALEKL
Template Known Secondary structure  ...TTTS
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T
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   219220 .........230.........240........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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