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Job DescriptionA2A5R2
Confidence65.51%DateWed Jul 10 14:14:35 BST 2013
Rank47Aligned Residues112
% Identity12%Templatec1vsy5_
PDB info PDB header:hydrolaseChain: 5: PDB Molecule:proteasome activator blm10; PDBTitle: proteasome activator complex
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13391340.........1350.........1360.........1370.........1380....... ..1390.......
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Query Sequence  ILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQDLFRIVFR. IFDNMKLPEQ
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Template Sequence  LLVDIIQLATSLYPDIYKPAQGTLVHCMKQ. . . . . . . . . LVGSYGVVINKIIPSLEKAIK
Template Known Secondary structure  TSS
TT.........BTT
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   1280.........1290.........1300......... 1310.........1320.........1330
 
   1398.1400.........1410.........1420.........1430.........1440.........1450.......
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Query Sequence  QSEKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQWCVKQDNEQLARSGTNC
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Template Sequence  DHDYMKIQVILNVLLIKKIHRKLMTDY. . . . . KDIGRLIFLLIECCRVNELEIGMYADKI
Template Known Secondary structure  T
S
TTSGGG
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SSSSTTT
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   1331........1340.........1350....... ..1360.........1370.........1380.....
 
   1458.1460....
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Query Sequence  LENLVIS
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Template Conservation     
   
Template Sequence  LTDIVIG
Template Known Secondary structure  TS
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   1386...1390..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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