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Job DescriptionA2A5R2
Confidence69.81%DateWed Jul 10 14:14:35 BST 2013
Rank40Aligned Residues192
% Identity13%Templatec4db9A_
PDB info PDB header:de novo proteinChain: A: PDB Molecule:armadillo repeat protein, yiiim3aiii; PDBTitle: designed armadillo repeat protein (yiiim3aiii)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1147..1150.........1160.........1170.........1180.........1190.........1200......
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Query Sequence  DHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTI
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Template Sequence  PQMVQQLNSPDQQELQSALRKLSQIA. . . SGGNEQIQAVIDAGALPALVQLLS. SPNEQI
Template Known Secondary structure  GGG
S
...TS
TTGGG.
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   14.....20.........30......... 40.........50.........60... ......
 
   1207..1210.........1220........ .1230.........1240.........1250.........1260.....
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Query Sequence  RDMVIRCIAQMVSSQAANIRSG. WKNIFAVFHQAASDHDGNIVELAFQTTGHIVSTIFQH
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Template Sequence  LQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ
Template Known Secondary structure  TTS
TTTT
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TTS
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   70.........80.........90.........100.........110.........120.........
 
   1266...1270.........1280.........1290.........1300.........1310.........1320.....
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Query Sequence  HFPAAIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTSDDMNV
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Template Sequence  I. . . QAVIDAGALPALVQLLS. SPNEQILQEALWALSNIASGGNEQKQAVKEAG. . . . . .
Template Known Secondary structure  ...TTTT.
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   130 .........140....... ..150.........160.........170.........
 
   1326...1330.........1340.........1350.........1360.....
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Query Sequence  APGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEI
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Template Sequence  . . . . . . . . . . . . . AEPALEQLQSSPNEKIQKEAQEALEKI
Template Known Secondary structure  .............TT
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   180.........190.........200......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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