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Job DescriptionA2A699
Confidence60.96%DateWed Jul 10 14:20:28 BST 2013
Rank57Aligned Residues61
% Identity23%Templatec3uxfA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:fimbrial subunit type 1; PDBTitle: structure of the fimbrial protein fimp from actonomyces oris
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60..... ....70.........80.
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Query Sequence  VSGELVPLARASVDVFG. . . . . . . . . . . . . . . . . . . . . . . . . . . NRTLLAAGTTDSEGVA
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Template Sequence  PQAECKPVSDVEFTITKLNVDLTTYDGWKTLADLKGDVVKAGALKSTTVQKITTGANGLA
Template Known Secondary structure  S
S


B

S
S

TTSTTT
GGG

TT
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   70.........80.........90.........100.........110.........120.........
 
   82.......90.........100 .........
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Query Sequence  TLPLSYRLGTWVLVTAARP. . GFLTNSVPW
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Template Sequence  SFTDAQTEVGAYLVSETRTPDKVIPAEDFV
Template Known Secondary structure 
TTT

S

TTS

B

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   130.........140.........150.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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