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Job DescriptionA2A699
Confidence47.87%DateWed Jul 10 14:20:28 BST 2013
Rank65Aligned Residues120
% Identity12%Templatec4e9lA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:attaching and effacing protein, pathogenesis factor; PDBTitle: fdec, a novel broadly conserved escherichia coli adhesin eliciting2 protection against urinary tract infections
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.... .....70.........80....
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Query Sequence  SPPEPPSPQEILIKVQVYVSGELVPLARASVDVF. . . . . . GNRTLLAAGTTDSEGVATLP
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Template Sequence  NPDKPVVGGTVTAIWTAKDA. NDNPVTGLNPDAPSLSGAAAAGSTASGWTDNGDGTWTAQ
Template Known Secondary structure  SSS
BTTS
B
T.T

B

S





SGGGTT




SSS
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   693......700.........710.. .......720.........730.........740.........750.
 
   85....90. ........100.........110.........120.........130.........140...
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Query Sequence  LSYRLGT. WVLVTAARPGFLTNSVPWRVDKLPLYASVSLYLLPERPATLILYEDLVHILL
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Template Sequence  ISLGTTAGELDVMPKLNGQDAAANAAKVTVVADALSSNQSKVSVAEDHV. KAGESTTVTL
Template Known Secondary structure 

S


TT
SSS
B

SB
TTT
S
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   752.......760.........770.........780.........790.........800 .........810
 
   144.....150..
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Query Sequence  GSPGARSQP
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Template Sequence  VAKDAHGNA
Template Known Secondary structure 
BBTT

B
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   811........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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