Return to main results Retrieve Phyre Job Id

Job DescriptionA1L3C1
Confidence31.28%DateWed Jul 10 14:09:30 BST 2013
Rank9Aligned Residues43
% Identity23%Templatec3ny0D_
PDB info PDB header:metal binding proteinChain: D: PDB Molecule:urease accessory protein uree; PDBTitle: crystal structure of uree from helicobacter pylori (ni2+ bound form)
Resolution3.09 Å
Model Dimensions (Å)X:28.738 Y:26.977 Z:27.794

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.... .....140..
Predicted Secondary structure 












....



Query SS confidence 


































. . . .







Query Sequence  FPLQFVQLFVHDESRQQLKVKFRTGRAFYLQLRSP. . . . PETLDCEF
Query Conservation 


 

 
 


    





 








  
....      

Alig confidence 


































....







Template Conservation    

 
 
   
  


 
  
  
 



 
       
  



 
Template Sequence  FSVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILF
Template Known Secondary structure  S

TTGGG
SS

TTS
B

SS

TT


TTB

Template Predicted Secondary structure 



















Template SS confidence 














































   18.20.........30.........40.........50.........60....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D