Job Description A1Y9I9 Confidence 99.33% Date Wed Jul 10 14:16:46 BST 2013 Rank 78 Aligned Residues 154 % Identity 23% Template c4dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein ttha1493; PDBTitle: thermus thermophilus m5c1942 methyltransferase rlmo Resolution 1.70 Å

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		91	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		M	R	L	V	E	E	K	A	P	.	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D
Query Conservation											.
Alig confidence											.																				.	.	.
Template Conservation																															.	.	.
Template Sequence		R	L	F	E	A	M	V	R	P	G	E	R	V	L	D	V	Y	S	Y	V	G	G	F	A	L	R	A	A	R	.	.	.	K	G	A	Y	A	L	A	V	D	K	D	L	E	A	L	G	V	L	D	Q	A	A	L	R	L	G	L	R
Template Known Secondary structure						T	T			T	T							S		T	T	T									.	.	.	T	T								S																T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.														.	.
Query SS confidence																																			.	.	.	.	.	.	.	.														.	.
Query Sequence		E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	.	.	.	.	.	.	.	.	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	.	.	E	A	H	A
Query Conservation																																			.	.	.	.	.	.	.	.														.	.
Alig confidence		.	.	.																		.	.	.	.	.									.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.																		.	.	.	.	.
Template Sequence		.	.	.	V	D	I	R	H	G	E	A	L	P	T	L	R	G	L	E	G	.	.	.	.	.	P	F	H	H	V	L	L	D	P	P	T	L	V	K	R	P	E	E	L	P	A	M	K	R	H	L	V	D	L	V	R	E	A	L	R
Template Known Secondary structure		.	.	.						S								T				.	.	.	.	.														S	S	G	G	G
Template Predicted Secondary structure		.	.	.																		.	.	.	.	.
Template SS confidence
					263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.						280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure										.																				.	.	.	.
Query SS confidence										.																				.	.	.	.
Query Sequence		L	L	P	H	G	A	T	V	.	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	.	.	.	.	C	G	R	Y	R	C	R	L	H	H	T	S	L	P	D	F	P	A	I	K	D	G	I	A	Q	L	T	Y
Query Conservation										.																				.	.	.	.
Alig confidence										.																				.	.	.	.
Template Conservation
Template Sequence		L	L	A	E	E	G	F	L	W	L	S	S	C	S	Y	H	L	R	L	E	D	L	L	E	V	A	R	R	A	A	A	D	L	G	R	R	L	R	V	H	R	V	T	Y	Q	P	E	D	H	P	W	S	L	H	I	P	E	S	L	Y
Template Known Secondary structure		T														T	T	S																	T													T	T	S				T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		255
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		375

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D