Job Description A1Y9I9 Confidence 66.04% Date Wed Jul 10 14:16:46 BST 2013 Rank 420 Aligned Residues 118 % Identity 17% Template c4dadA_ PDB info PDB header:signaling protein, signal transduction Chain: A: PDB Molecule:putative pilus assembly-related protein; PDBTitle: crystal structure of a putative pilus assembly-related protein2 (bpss2195) from burkholderia pseudomallei k96243 at 2.50 a resolution3 (psi community target, shapiro l.) Resolution 2.50 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R
Query Conservation
Alig confidence																												.	.																			.	.	.
Template Conservation																												.	.																			.	.	.
Template Sequence		N	I	L	V	A	S	E	D	A	S	R	L	A	H	L	A	R	L	V	G	D	A	G	R	Y	R	.	.	V	T	R	T	V	G	R	A	A	Q	I	V	Q	R	T	D	G	L	.	.	.	D	A	F	D	I	L	X	I	D	G	A
Template Known Secondary structure								S																	S			.	.												T	T						.	.	.	T	T		S							T
Template Predicted Secondary structure																												.	.																			.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C	G	R	Y	R	C	R	L	H	H	T	S	L	P	D	F	P	A
Query Conservation
Alig confidence					.																						.	.																																.	.
Template Conservation					.																						.	.																																.	.
Template Sequence		A	L	D	.	T	A	E	L	A	A	I	E	K	L	S	R	L	H	P	G	L	T	C	L	L	.	.	V	T	T	D	A	S	S	Q	T	L	L	D	A	X	R	A	G	V	R	D	V	L	R	W	P	L	E	P	R	A	L	.	.
Template Known Secondary structure		T			.															T	T						.	.			S												T	T	T							S	S							.	.
Template Predicted Secondary structure					.																						.	.																																.	.
Template SS confidence
		58	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		245	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	D	G	I	A	Q	L	T
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	D	A	L	K	R	A	A
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			113	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D