Job Description A1Y9I9 Confidence 98.56% Date Wed Jul 10 14:16:46 BST 2013 Rank 241 Aligned Residues 115 % Identity 19% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

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		89	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		I	L	M	R	L	V	E	E	.	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G
Query Conservation										.
Alig confidence										.																							.	.	.	.																					.	.	.	.	.
Template Conservation																																	.	.	.	.																					.	.	.	.	.
Template Sequence		L	M	D	A	L	E	R	E	G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	.	.	.	.	R	N	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	G	G	.	.	.	.	.
Template Known Secondary structure										T			S							T		T	T								T	T	.	.	.	.	T	S							S							T		S	S	S	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.																					.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.													.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	H	R	P	R	Y	Y	L	R	D	L	Q	L	L
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.														.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	N	L	V	R	A	D	L	L	C	S	I	N	Q	.	.	.	.	.	.	.	E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F
Template Known Secondary structure		.	.	.	.	.	.						S	T	T	T	T	S		G	.	.	.	.	.	.	.	G	G		S									B	T	T				T	T	T	B			G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
								64	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	H	A	L	L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C	G
Query Conservation
Alig confidence					.	.														.
Template Conservation					.	.														.
Template Sequence		V	D	A	.	.	V	T	V	G	M	L	Y	L	L	V	I	E	A	.	N	R	P	K	E	V	L	A	R	L	E	E	R	G
Template Known Secondary structure					.	.			S	S								G	G	.	G												T	T
Template Predicted Secondary structure					.	.														.
Template SS confidence
		111	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D