Job Description A1Y9I9 Confidence 97.39% Date Wed Jul 10 14:16:46 BST 2013 Rank 310 Aligned Residues 107 % Identity 22% Template c3pvcA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis Resolution 2.31 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.	.	.	130															.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	.	.	.	.	.	.	.	.	.	.	.	P	P	G	S	R	L	L	T	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	S	R	T
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	A	E	T	G	F	G	T	G	L	N	F	L	T	L	W	R	D	F	A	L	F	R	Q	Q	S	P	N	A	T	L	R	R	L	H	Y	I	S	F	E	K	Y	P	L	H	V	A	D	L	A	S	A	H	A	R	W	P	E	L
Template Known Secondary structure									T	T	S																		T	T	S	S											S	S												T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.													.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																				.												.
Template Conservation																																																	.
Template Sequence		A	S	F	A	E	Q	L	R	A	Q	W	P	L	P	L	A	G	C	H	R	I	L	L	A	D	G	A	I	T	L	D	L	W	F	G	D	V	N	T	L	L	P	T	L	D	D	S	.	L	N	N	Q	V	D	A	W	F	L	D	G
Template Known Secondary structure											T						S								T	T	T	T								S						G	G	G			G	G	.	G	T	T									S
Template Predicted Secondary structure																																																	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.
				183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A
Query Conservation		.	.
Alig confidence		.	.																	.
Template Conservation																				.
Template Sequence		F	A	P	N	P	D	X	W	N	E	Q	L	F	N	A	X	A	R	.	X	T	R	P	G	G	T	F	S	T
Template Known Secondary structure		S					T	T		S										.
Template Predicted Secondary structure																				.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D