Job Description A1Y9I9 Confidence 99.07% Date Wed Jul 10 14:16:46 BST 2013 Rank 150 Aligned Residues 128 % Identity 13% Template c3p2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase Resolution 2.70 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	.	.
Query Conservation																																																												.	.
Alig confidence																															.																													.	.
Template Conservation																															.
Template Sequence		T	E	I	I	G	Q	F	D	R	V	H	I	D	L	G	T	G	D	G	R	N	I	Y	K	L	A	I	N	D	.	Q	N	T	F	Y	I	G	I	D	P	V	K	E	N	L	F	D	I	S	K	K	I	I	K	K	P	S	K	G	G
Template Known Secondary structure							T	S	S							T		T	T	S											.	T	T								S		G	G	G	G								T	S		G	G	G	T
Template Predicted Secondary structure																															.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.																																		.	.	.	.	.	.	.	.
Query SS confidence		.																																		.	.	.	.	.	.	.	.
Query Sequence		.	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	.	.	.	.	.	.	.	.	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L
Query Conservation		.																																		.	.	.	.	.	.	.	.
Alig confidence		.			.									.									.	.	.	.										.	.	.	.	.	.	.	.												.	.
Template Conservation					.									.									.	.	.	.																													.	.
Template Sequence		L	S	N	.	V	V	F	V	I	A	A	A	.	E	S	L	P	F	E	L	K	.	.	.	.	N	I	A	D	S	I	S	I	L	F	P	W	G	T	L	L	E	Y	V	I	K	P	N	R	D	I	L	S	.	.	N	V	A	D	L
Template Known Secondary structure			S	S	.								T	.	T	S			G	G	G	T	.	.	.	.	T									S											T	T							.	.					T
Template Predicted Secondary structure					.									.									.	.	.	.																													.	.
Template SS confidence
		77	.	.		80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	P	H	G	A	T	V	L	A	D	.	.	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C	G
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		A	K	K	E	A	H	F	E	F	V	T	T	Y	K	A	Y	F	L	S	E	Q	Y	K	A	E	L	S	N	S	G
Template Known Secondary structure																				S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D