Job Description A1Y9I9 Confidence 99.28% Date Wed Jul 10 14:16:46 BST 2013 Rank 96 Aligned Residues 155 % Identity 15% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		S	Y	V	L	T	H	A	L	P	G	D	P	G	H	I	L	T	T	L	D	H	W	S	S	C	C	E	Y	L	S	H	M	G	P	V	K	G	Q	I	L	M	R	L	V	E	E	K	A	P	.	A	C	V	L	E	L	G	T	Y	C
Query Conservation																																																			.
Alig confidence																							.	.																											.
Template Conservation																							.	.
Template Sequence		H	R	L	V	T	H	Q	P	G	S	G	A	L	A	P	L	E	R	V	F	Y	.	.	E	R	L	P	A	V	L	A	T	R	E	R	H	G	H	F	R	R	A	L	Q	R	H	L	R	P	G	C	V	V	A	S	V	P	C	G	W
Template Known Secondary structure									T	T		S											.	.																										T	T						T	T		T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A
Query Conservation
Alig confidence																																												.															.	.	.
Template Conservation																																												.															.	.	.
Template Sequence		X	S	E	L	L	A	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	A	L	A	G	Q	.	I	T	L	H	R	Q	D	A	W	K	L	D	T	R	.	.	.
Template Known Secondary structure							T	S			T	T		T	T								S													T	T	S	T	T	G	G	G	.								G	G	G					.	.	.
Template Predicted Secondary structure																																												.															.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.
		170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		Q	H	Q	L	N	R	A	D	L	V	L	L	.	.	.	.	.	.	A	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A
Query Conservation														.	.	.	.	.	.
Alig confidence		.	.	.	.									.	.	.	.	.	.													.	.
Template Conservation		.	.	.	.																											.	.
Template Sequence		.	.	.	.	E	G	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	E	L	Y	R	.	.	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T	P	P	P	A
Template Known Secondary structure		.	.	.	.	S									S	S	G	G	G													.	.																					T	T
Template Predicted Secondary structure		.	.	.	.																											.	.
Template SS confidence
						183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D