Job Description A1Y9I9 Confidence 78.92% Date Wed Jul 10 14:16:46 BST 2013 Rank 374 Aligned Residues 66 % Identity 27% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R
Query Conservation
Alig confidence																										.	.	.	.																			.	.	.	.
Template Conservation																										.	.	.	.																			.	.	.	.
Template Sequence		R	I	L	V	V	D	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	.	.	.	.	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	.	.	.	.	R	P	D	L	V	L	L	D	L	M
Template Known Secondary structure								S															T	T		.	.	.	.								G	G	G									.	.	.	.			S						S	S
Template Predicted Secondary structure																										.	.	.	.																			.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		L	P	G	.	M	N	G	I	D	V	C	R	V	L	R
Template Known Secondary structure			S	S	.	S
Template Predicted Secondary structure					.
Template SS confidence
		59	60	.		.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D