Job Description A1Y9I9 Confidence 98.93% Date Wed Jul 10 14:16:46 BST 2013 Rank 181 Aligned Residues 109 % Identity 17% Template c3mq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb Resolution 1.69 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		E	Q	L	R	S	Q	Y	D	D	V	V	L	D	V	G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	.	P	S	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A	K	P	A	K	G	G
Template Known Secondary structure						T	T	S	S							S		T	T												.	T	T								S		G	G	G	G								T	S		G	G	G	T
Template Predicted Secondary structure																															.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
				152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.								.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.																																		.	.	.	.	.	.	.
Query SS confidence		.	.																																		.	.	.	.	.	.	.
Query Sequence		.	.	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	.	.	.	.	.	.	.	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P
Query Conservation		.	.																																		.	.	.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.	.																.	.	.	.	.	.	.										.	.
Template Conservation																.	.	.	.	.	.																																.	.
Template Sequence		L	P	N	L	L	Y	L	W	A	T	A	E	R	L	.	.	.	.	.	.	P	P	L	S	G	V	G	E	L	H	V	L	M	P	W	G	S	L	L	R	G	V	L	G	S	S	P	E	M	L	R	.	.	G	M	A	A	V	C	R
Template Known Secondary structure			T	T								S	T	T		.	.	.	.	.	.		S											S											T	S	S	S					.	.					T
Template Predicted Secondary structure																.	.	.	.	.	.																																.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.
		203	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	A	T	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	A	S	F	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D