Job Description A1Y9I9 Confidence 99.65% Date Wed Jul 10 14:16:46 BST 2013 Rank 22 Aligned Residues 114 % Identity 25% Template c3mb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine Resolution 1.60 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	G	Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	D	A	A	L	I	V	A	Y	A	G	I	S	P	G	D	F	I	V	E	A	G	V	G	S	G	A	L	T	L	F	L	A	N	I	V	G	P	E	G	R	V	V	S	Y	E	I	R	E	D	F	A	K	L	A	W	E	N	I
Template Known Secondary structure												T	T			T	T									T	T	S												T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H
Query Conservation
Alig confidence										.															.	.	.	.	.	.	.															.	.										.	.
Template Conservation										.															.	.	.	.	.	.	.															.	.										.	.
Template Sequence		K	W	A	G	F	D	D	R	.	V	T	I	K	L	K	D	I	Y	E	G	I	E	E	.	.	.	.	.	.	.	E	N	V	D	H	V	I	L	D	L	P	Q	P	E	.	.	R	V	V	E	H	A	A	K	A	.	.	L	K	P
Template Known Secondary structure					T		T	T	T	.						S		G	G	G					.	.	.	.	.	.	.		S								S	S		G	G	.	.	G	G								.	.
Template Predicted Secondary structure										.															.	.	.	.	.	.	.															.	.										.	.
Template SS confidence
		139	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.			.	.	.
		204	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	F	F	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D