Job Description A1Y9I9 Confidence 98.72% Date Wed Jul 10 14:16:46 BST 2013 Rank 213 Aligned Residues 113 % Identity 24% Template c3m6wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine Resolution 1.30 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	V	G	V	L	L	D	P	K	P	G	E	R	V	L	D	L	A	A	A	P	G	G	K	T	T	H	L	A	A	R	M	G	G	K	G	L	L	L	A	N	E	V	D	G	K	R	V	R	G	L	L	E	N	V	E	R	W	G
Template Known Secondary structure												T	T						S	S		T	T											T	T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																		.	.	.	.	.	.	.	190
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	P	R	Y	Y	L	R
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.		.																.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.		.																.	.	.	.	.
Template Sequence		A	P	L	.	.	A	.	V	T	Q	A	P	P	R	A	L	A	E	A	F	G	T	.	.	.	.	.	Y	F	H	R	V	L	L	D	A	P	C	S	G	E	G	M	F	R	K	D	R	E	A	A	R	H	W	G	P	S	A	P	K
Template Known Secondary structure					.	.		.				S											S	.	.	.	.	.														G	G	G	T	T	T		T	T	S	G	G	G			T	T
Template Predicted Secondary structure					.	.		.																.	.	.	.	.
Template SS confidence
		151	.	.			.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		191	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		D	L	Q	.	.	.	.	.	.	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	A	E	V	Q	K	A	L	L	A	Q	A	S	R	L	L	G	P	G	G	V	L	V
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D