Job Description A1Y9I9 Confidence 96.58% Date Wed Jul 10 14:16:46 BST 2013 Rank 319 Aligned Residues 147 % Identity 18% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		84	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																													.	.
Query SS confidence													.	.	.	.																													.	.
Query Sequence		P	V	K	G	Q	I	L	M	R	L	V	.	.	.	.	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	.	.	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A
Query Conservation													.	.	.	.																													.	.
Alig confidence													.	.	.	.																													.	.
Template Conservation
Template Sequence		Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N
Template Known Secondary structure														T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.
Query Sequence		V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		L	A	R	X	N	X	I	L	H	G	V	P	I	E	N	Q	F	L	H	N	A	.	.	.	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D
Template Known Secondary structure										T	T			G	G	G						S	.	.	.		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
																			189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.															.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.															.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	.	.	.	T	V	L	A	D	H	V	L	F	P	G	A	P	R	.	.	F	L	Q	Y	T	K	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.							.	.	.															.	.
Template Conservation																													.
Template Sequence		D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	.	L	K	Q	D	N	G	V	X	A	I	V	L	P	H	G	V	L	F	R	G	N	A	E	G	T	I	R	K	A	L	L	E
Template Known Secondary structure		S	T	T	T	G	G	G	S	S				T	T													T	.	B		T	T	T									T
Template Predicted Secondary structure																													.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	R	Y	R	C	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	A	I	D	T	V	I
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D