 |
| Job Description | A1Y9I9 | | Confidence | 45.85% | Date | Wed Jul 10 14:16:46 BST 2013 |
| Rank | 477 | Aligned Residues | 79 |
| % Identity | 18% | Template | c3gt7A_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:sensor protein; |
PDBTitle: crystal structure of signal receiver domain of signal2 transduction histidine kinase from syntrophus3 aciditrophicus
|
| Resolution | 2.30 Å |
|
 |
|   |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | S | R | L | L | T | V | E | R | D | S | R | T | A | A | V | A | E | K | V | I | R | L | A | G | F | D | E | Q | M | V | E | L | I | A | G | S | S | E | E | V | I | P | R | L | R | A | Q | H | Q | L | N | R | A | D | L | V | L | L | A |
| Query Conservation |   |
  |
|   |
|   |
|
|
|   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
|   |
|   |   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   | . | . | . | . |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |
|
|
|
|   |
|
| Template Sequence |   |
A | G | E | I | L | I | V | E | D | S | P | T | Q | A | E | H | L | K | H | I | L | E | E | T | G | Y | . |
. |
. |
. |
Q | T | E | H | V | R | N | G | R | E | A | V | R | F | L | S | L | . |
. |
. |
. |
T | R | P | D | L | I | I | S | D |
| Template Known Secondary structure |   |
|
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| . | . | . | . |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | . | . | . | . |
|
|
| S |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
. | . | . | . | . | . | 60 | . | . |
|   |
|   |   |
183 | . | . | . | |
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  | . | . |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
H | R | P | R | . |
. |
Y | Y | L | R | D | L | Q | L | L | E | A | H | A | L | L | P | H | G | A | T | V | L | A |
| Query Conservation |   |
|   |
|   | . | . |   |
|   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|   |
|
| Template Sequence |   |
V | L | M | P | E | M | D | G | Y | A | L | C | R | W | L | K | G | Q | P | D | L | R | T | I | P | V | I | L | L |
| Template Known Secondary structure |   |
S |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | S | T | T | T | T | T | S |
|  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|