Job Description A1Y9I9 Confidence 99.40% Date Wed Jul 10 14:16:46 BST 2013 Rank 66 Aligned Residues 127 % Identity 13% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		R	A	F	I	D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	.	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	R
Template Known Secondary structure									S		G	G	G							S		G	G	G										S	.	T	T								S												S
Template Predicted Secondary structure																																			.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	.	.	.	.	.	.	.	L	R	D	L	Q	L	L	E	A	H	A	L
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence					.	.																		.	.	.	.																.	.	.	.	.	.	.											.	.
Template Conservation					.	.																		.	.	.	.																																	.	.
Template Sequence		A	P	R	.	.	V	K	I	R	V	D	D	A	R	X	V	A	E	S	F	T	P	.	.	.	.	A	S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	V	E	F	F	E	H	C	H	R	G	.	.
Template Known Secondary structure		T	T	T	.	.						S								T			T	.	.	.	.	T										S	T	T	S				G	G	G	S	B											.	.
Template Predicted Secondary structure					.	.																		.	.	.	.																																	.	.
Template SS confidence
		135	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		L	A	P	G	G	L	Y	V	A	.	N	C	G	D	H	S	D	L	R	G	A	K	S	E
Template Known Secondary structure											.						T	T
Template Predicted Secondary structure											.
Template SS confidence
		187	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D