Job Description A1Y9I9 Confidence 86.37% Date Wed Jul 10 14:16:46 BST 2013 Rank 346 Aligned Residues 121 % Identity 20% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.																										.	.	.
Query SS confidence												.																										.	.	.
Query Sequence		L	M	R	L	V	E	E	K	A	P	.	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	.	.	.	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L
Query Conservation												.																										.	.	.
Alig confidence												.									.	.																.	.	.
Template Conservation																					.	.
Template Sequence		L	E	K	L	L	K	E	R	G	P	I	K	K	I	G	V	L	G	M	.	.	G	Y	V	G	I	P	A	A	V	L	F	A	D	A	P	C	F	E	K	V	L	G	F	Q	R	N	S	K	S	S	G	Y	K	I	E	M	L	N	R
Template Known Secondary structure											S										.	.	S	T	T											S	T	T												T	T	T	T	T						T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.													.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	.	.	.	.	.	.	.	.	.	Q	L	N	R	A	D	L	V	L	L	.	.	.	.	.	.	.	.	.	.	.	.	A	H	R
Query Conservation																												.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.
Template Sequence		G	E	S	P	.	.	.	L	K	G	E	E	P	G	L	E	E	L	I	G	K	V	V	K	A	G	K	F	E	C	T	P	D	F	S	R	I	S	E	L	D	A	V	T	L	A	I	Q	T	P	F	A	N	P	K	D	L	E	P	D
Template Known Secondary structure		T				.	.	.	S	S			G	G	G											T	T						S		G	G	G	G	G	G		S												S	S			S	S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		66	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		F	S	A	L	I	D	G	I	R	N	V	G	K	Y	.	.	L	K	P	G	M	L	V	V	L	E	S	T	I	T	P	G	T
Template Known Secondary structure																.	.			T	T							S				T	T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D